SCNN1A

associated omics data
sodium channel epithelial 1 subunit alphaGenealiases: BESC2 · ENaCa · ENaCalpha · LIDLS3 · PHA1B1 · SCNEA

Q-omics provides the consensus-scored SCNN1A profile across patient tissues and cancer cell-line models. SCNN1A expression is associated with patient survival in 28 of 34 cancer types, with the highest sampling consensus in HNSC. Among the 18 cancer types available for tumor–normal comparison, SCNN1A is differentially expressed in 11, with the highest sampling consensus in KIRC. Additionally, SCNN1A RNA expression shows 15,971 significant gene co-expression associations, with the highest sampling consensus in TGCT. Together, these results highlight HNSC, KIRC, and TGCT as cancer lineages where SCNN1A shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes SCNN1A survival associations across molecular data types. SCNN1A RNA expression shows survival associations in the most cancer types (28), followed by mutation status (8) and mass-spec protein abundance (3). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
SCNN1A data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier28HNSC (59)view →
MutationKaplan–Meier8THYM (42)view →
Protein (mass-spec)Kaplan–Meier3LSCC (18)view →
This table ranks reproducible SCNN1A RNA expression–survival associations across cancer types. High SCNN1A expression shows unfavorable associations in PAAD, OV and LAML, but favorable associations in HNSC, MESO and LUAD. The HNSC Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p = .001). Together, the overview and detailed table identify HNSC as the clearest survival context for SCNN1A RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
HNSCOSQuartileAll0.8470.672.00159view →
PAADOSMedianAll0.2970.498.00355view →
MESODFSQuartileAll0.5410.256.00438view →
OVOSMedianAll0.6380.738<.00136view →
LAMLDFSTertileAll0.4200.637.00328view →
LUADOSQuartileIII,IV0.7760.459.01423view →
Pink = unfavorable, green = favorable. all 28 lineages →

SCNN1A-HNSC (OS)

Kaplan–Meier survival curve for SCNN1A RNA expression in HNSC: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes SCNN1A tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 11, while mass-spec protein shows differences in 3. The strongest signals are observed in KIRC for RNA and LUAD for protein.
SCNN1A data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot11KIRC (12)view →
Protein (mass-spec)Box plot3LUAD (6)view →
This table ranks reproducible tumor–normal expression differences for SCNN1A. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. SCNN1A shows lower tumor expression in KIRC, HNSC, KIRP and LUSC and higher tumor expression in BRCA and CHOL. The KIRC box plot shows higher SCNN1A RNA expression in normal versus tumor tissue (log2 FC = −5.127, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
KIRCFemaleII,III,IV−5.127<.00112view →
HNSCFemaleIII,IV−2.605<.00112view →
KIRPAllAll−2.155<.0019view →
LUSCMaleAll−1.337<.0017view →
BRCAAllIII,IV+1.508<.0016view →
CHOLMaleAll+3.743<.0015view →
Green = repressed in tumor. all 11 lineages →

SCNN1A-KIRC

Tumor-vs-normal expression box plot for SCNN1A in KIRC.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with SCNN1A in patient tissues and cancer cell lines. In patient samples, SCNN1A shows the broadest associations at the RNA and protein expression levels, with TGCT recurring as the lineage with the largest associated feature set. In cancer cell lines, SCNN1A RNA and mutation anchors are most strongly linked to RNA-expression features, especially in LUNG_NSCLC_LUAD, while CRISPR and shRNA rows add functional-dependency signals in BLOOD_Myeloma and LUNG_SCLC.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA15,971TGCT (4992)view →
Protein (mass-spec)15,574BRCA (5558)view →
Protein (mass-spec)
Protein (mass-spec)2,766LSCC (1425)view →
RNA1,441LSCC (620)view →
Mutation
RNA2,254UCEC (1845)view →
Protein (RPPA)24UCEC (18)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR1,734LUNG_NSCLC_LUAD (151)view →
RNA1,544BLOOD_Myeloma (288)view →
RNA
RNA10,794LUNG_SCLC (2807)view →
Function (RNA)4,892LUNG_NSCLC_LUAD (1107)view →
Mutation
Mutation2,042BLOOD_Leukemia (929)view →
RNA11BLOOD_Lymphoma (5)view →
shRNA
RNA1,559BLOOD_Leukemia (481)view →
shRNA1,439CNS (163)view →