RGN

associated omics data
regucalcinGenealiases: GNL · HEL-S-41 · RC · SMP30

Q-omics provides the consensus-scored RGN profile across patient tissues and cancer cell-line models. RGN expression is associated with patient survival in 24 of 34 cancer types, with the highest sampling consensus in LUAD. Among the 18 cancer types available for tumor–normal comparison, RGN is differentially expressed in 15, with the highest sampling consensus in KIRC. Additionally, RGN protein abundance shows 37,935 significant protein co-abundance associations, with the highest sampling consensus in LSCC. Together, these results highlight LUAD, KIRC, and LSCC as cancer lineages where RGN shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes RGN survival associations across molecular data types. RGN RNA expression shows survival associations in the most cancer types (24), followed by mutation status (7) and mass-spec protein abundance (12). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
RGN data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier24LUAD (103)view →
Protein (mass-spec)Kaplan–Meier12CCRCC (42)view →
MutationKaplan–Meier7COAD (48)view →
This table ranks reproducible RGN RNA expression–survival associations across cancer types. High RGN expression shows unfavorable associations in COAD and LGG, but favorable associations in LUAD, KIRC, LIHC and KIRP. The LUAD Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p < 0.001). Together, the overview and detailed table identify LUAD as the clearest survival context for RGN RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
LUADOSTertileAll0.8670.740<.001103view →
KIRCOSTertileAll0.7000.526<.00168view →
LIHCOSMedianAll0.6990.444<.00163view →
COADDFSMedianIII,IV0.4450.769<.00151view →
KIRPOSQuartileAll0.9630.782<.00151view →
LGGOSMedianAll0.7340.878<.00146view →
Pink = unfavorable, green = favorable. all 24 lineages →

RGN-LUAD (OS)

Kaplan–Meier survival curve for RGN RNA expression in LUAD: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes RGN tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 15, while mass-spec protein shows differences in 12. The strongest signals are observed in KIRC for RNA and CCRCC for protein.
RGN data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot15KIRC (12)view →
Protein (mass-spec)Box plot12CCRCC (12)view →
This table ranks reproducible tumor–normal expression differences for RGN. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. RGN shows lower tumor expression in KIRC, KIRP, BLCA, HNSC, LUSC and LUAD. The KIRC box plot shows higher RGN RNA expression in normal versus tumor tissue (log2 FC = −1.193, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
KIRCMaleAll−1.193<.00112view →
KIRPAllIII,IV−2.411<.00111view →
BLCAAllIV−2.320<.00111view →
HNSCMaleAll−1.146<.00111view →
LUSCFemaleII,III,IV−3.025<.0019view →
LUADAllIII,IV−1.560<.0019view →
Green = repressed in tumor. all 15 lineages →

RGN-KIRC

Tumor-vs-normal expression box plot for RGN in KIRC.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with RGN in patient tissues and cancer cell lines. In patient samples, RGN shows the broadest associations at the RNA and protein expression levels, with LSCC recurring as the lineage with the largest associated feature set. In cancer cell lines, RGN RNA and mutation anchors are most strongly linked to RNA-expression features, especially in LIVER, while CRISPR and shRNA rows add functional-dependency signals in SKIN and BLOOD_Leukemia.
Associated data typeStrength (# associated data)Lineage of highest associated data
Protein (mass-spec)
Protein (mass-spec)37,935LSCC (13419)view →
RNA19,619LSCC (9818)view →
RNA
Protein (mass-spec)20,786LSCC (8329)view →
RNA16,888TGCT (5726)view →
Mutation
RNA964UCEC (922)view →
Protein (RPPA)24UCEC (24)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR1,970LIVER (176)view →
RNA1,598SKIN (237)view →
RNA
RNA2,735BLOOD_Leukemia (912)view →
Function (RNA)942LIVER (347)view →
shRNA
RNA1,867CNS (350)view →
shRNA1,737LUNG_NSCLC_LUAD (187)view →
Mutation
Mutation21SKIN (19)view →
RNA3SKIN (2)view →