TNN

associated omics data
tenascin NGenealiases: TN-W · TNW

Q-omics provides the consensus-scored TNN profile across patient tissues and cancer cell-line models. TNN expression is associated with patient survival in 25 of 34 cancer types, with the highest sampling consensus in BRCA. Among the 18 cancer types available for tumor–normal comparison, TNN is differentially expressed in 10, with the highest sampling consensus in KIRC. Additionally, TNN RNA expression shows 15,288 significant protein co-abundance associations, with the highest sampling consensus in BRCA. Together, these results highlight BRCA, and KIRC as cancer lineages where TNN shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes TNN survival associations across molecular data types. TNN RNA expression shows survival associations in the most cancer types (25), followed by mutation status (10) and mass-spec protein abundance (4). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
TNN data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier25BRCA (76)view →
MutationKaplan–Meier10BLCA (21)view →
Protein (mass-spec)Kaplan–Meier4LUAD (22)view →
This table ranks reproducible TNN RNA expression–survival associations across cancer types. High TNN expression shows unfavorable associations in KIRP, BLCA and ACC, but favorable associations in BRCA, KIRC and UCS. The BRCA Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p < 0.001). Together, the overview and detailed table identify BRCA as the clearest survival context for TNN RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
BRCAOSTertileIII,IV0.7400.448<.00176view →
KIRPDFSMedianIII,IV0.1550.801.00674view →
KIRCOSMedianAll0.7090.547<.00155view →
BLCAOSMedianAll0.5440.676.00147view →
UCSDFSMedianII,III,IV0.6450.252<.00144view →
ACCDFSMedianII,III,IV0.5170.890.00228view →
Pink = unfavorable, green = favorable. all 25 lineages →

TNN-BRCA (OS)

Kaplan–Meier survival curve for TNN RNA expression in BRCA: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes TNN tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 10, while mass-spec protein shows differences in 5. The strongest signals are observed in KIRC for RNA and PDAC for protein.
TNN data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot10KIRC (10)view →
Protein (mass-spec)Box plot5PDAC (6)view →
This table ranks reproducible tumor–normal expression differences for TNN. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. TNN shows lower tumor expression in KIRP, LIHC, THCA and BRCA and higher tumor expression in KIRC and BLCA. The KIRC box plot shows higher TNN RNA expression in tumor versus normal tissue (log2 FC = +0.376, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
KIRCAllII,III,IV+0.376<.00110view →
KIRPAllII,III,IV−0.466<.0018view →
LIHCAllII,III,IV−0.336.0036view →
THCAFemaleAll−0.599<.0015view →
BLCAAllIII,IV+0.285.0025view →
BRCAAllAll−1.096<.0014view →
Green = repressed in tumor. all 10 lineages →

TNN-KIRC

Tumor-vs-normal expression box plot for TNN in KIRC.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with TNN in patient tissues and cancer cell lines. In patient samples, TNN shows the broadest associations at the RNA and protein expression levels, with BRCA recurring as the lineage with the largest associated feature set. In cancer cell lines, TNN RNA and mutation anchors are most strongly linked to RNA-expression features, especially in LUNG_NSCLC_LUAD, while CRISPR and shRNA rows add functional-dependency signals in OESOPHAGUS and LARGE_INTESTINE.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
Protein (mass-spec)15,288BRCA (4880)view →
RNA13,995TGCT (5491)view →
Protein (mass-spec)
Protein (mass-spec)11,555BRCA (4431)view →
RNA9,504BRCA (6141)view →
Mutation
RNA6,081LUAD (1986)view →
Protein (RPPA)89STAD (33)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR1,555LUNG_NSCLC_LUAD (131)view →
RNA1,344OESOPHAGUS (217)view →
Mutation
Mutation7,054LARGE_INTESTINE (6420)view →
RNA1,359LARGE_INTESTINE (1210)view →
RNA
RNA1,946BLOOD_Leukemia (1056)view →
Function (RNA)815BLOOD_Leukemia (510)view →
Protein (mass-spec)
RNA1,731BLOOD_Leukemia (486)view →
CRISPR1,167OVARY (125)view →