TNN

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TNN protein abundance is significantly associated with the RNA expression of many other genes, with 9,504 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible TNN-associated genes across cancer lineages are POSTN, COL1A2, and TIMP3. Each is linked with TNN in more than 5 cancer types. Because this analysis shows association rather than direction, both TNN-to-partner and partner-to-TNN results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TNN versus POSTN in OV, with a Pearson correlation of 0.55.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TNN→partner) and Y-score (partner→TNN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVPOSTN →+3.966+1.668<.001<.00136
OVCOL1A2 →+1.577+0.963.009.00136
OVTIMP3 →+3.461+1.474<.001<.00135
OVTNFSF4 →+1.673+1.616<.001<.00135
BRCAGLT8D2 →+1.020+0.893<.001<.00135
OVCALD1 →+1.355+1.074.004.00535
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,504 associations by consensus.

TNN vs POSTN — OV

Per-sample scatter of TNN vs POSTN in OV (Pearson r = 0.55).

Explore this scatter interactively →

Exploration