SRRT

associated omics data
serrate, RNA effector moleculeGenealiases: ARS2 · ASR2 · serrate

Q-omics provides the consensus-scored SRRT profile across patient tissues and cancer cell-line models. SRRT expression is associated with patient survival in 27 of 34 cancer types, with the highest sampling consensus in UVM. Among the 18 cancer types available for tumor–normal comparison, SRRT is differentially expressed in 17, with the highest sampling consensus in COAD. Additionally, SRRT protein abundance shows 36,048 significant protein co-abundance associations, with the highest sampling consensus in GBM. Together, these results highlight UVM, COAD, and GBM as cancer lineages where SRRT shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes SRRT survival associations across molecular data types. SRRT RNA expression shows survival associations in the most cancer types (27), followed by mutation status (6) and mass-spec protein abundance (10). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
SRRT data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier27UVM (110)view →
Protein (mass-spec)Kaplan–Meier10HNSC (24)view →
MutationKaplan–Meier6BLCA (36)view →
This table ranks reproducible SRRT RNA expression–survival associations across cancer types. High SRRT expression shows unfavorable associations in UVM, KICH, ACC, LIHC, KIRC and LGG. The UVM Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify UVM as the clearest survival context for SRRT RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
UVMDFSMedianAll0.4170.804<.001110view →
KICHDFSQuartileII,III,IV0.2610.950<.001104view →
ACCDFSMedianAll0.3390.819<.001101view →
LIHCOSMedianAll0.7020.842<.00188view →
KIRCDFSQuartileII,III,IV0.3890.645.00168view →
LGGDFSMedianAll0.6380.830<.00154view →
Pink = unfavorable, green = favorable. all 27 lineages →

SRRT-UVM (DFS)

Kaplan–Meier survival curve for SRRT RNA expression in UVM: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes SRRT tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 17, while mass-spec protein shows differences in 7. The strongest signals are observed in COAD for RNA and COAD for protein.
SRRT data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot17COAD (11)view →
Protein (mass-spec)Box plot7COAD (11)view →
This table ranks reproducible tumor–normal expression differences for SRRT. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. SRRT shows higher tumor expression in COAD, HNSC, STAD, LIHC, LUSC and LUAD. The COAD box plot shows higher SRRT RNA expression in tumor versus normal tissue (log2 FC = +0.946, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
COADFemaleII,III,IV+0.946<.00111view →
HNSCMaleIV+0.823<.00110view →
STADMaleII,III,IV+1.280<.0019view →
LIHCFemaleII,III,IV+1.125<.0019view →
LUSCMaleIII,IV+1.282<.0018view →
LUADAllIII,IV+0.731<.0018view →
Green = repressed in tumor. all 17 lineages →

SRRT-COAD

Tumor-vs-normal expression box plot for SRRT in COAD.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with SRRT in patient tissues and cancer cell lines. In patient samples, SRRT shows the broadest associations at the RNA and protein expression levels, with GBM recurring as the lineage with the largest associated feature set. In cancer cell lines, SRRT RNA and mutation anchors are most strongly linked to RNA-expression features, especially in CNS, while CRISPR and shRNA rows add functional-dependency signals in LARGE_INTESTINE and BLOOD_Lymphoma.
Associated data typeStrength (# associated data)Lineage of highest associated data
Protein (mass-spec)
Protein (mass-spec)36,048GBM (13873)view →
RNA19,916LSCC (11628)view →
RNA
RNA20,136ACC (10670)view →
Protein (mass-spec)17,240LSCC (7983)view →
Mutation
RNA3,369UCEC (3040)view →
Protein (RPPA)38UCEC (38)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR2,040CNS (187)view →
RNA1,696CNS (329)view →
RNA
RNA11,678LARGE_INTESTINE (4798)view →
Function (RNA)4,987BLOOD_Lymphoma (1648)view →
Mutation
Mutation5,437LARGE_INTESTINE (4011)view →
RNA1,159LARGE_INTESTINE (1149)view →
Protein (mass-spec)
RNA3,152BLOOD_Leukemia (1006)view →
Function (mass-spec)2,071BONE (719)view →