PRICKLE3

associated omics data
prickle planar cell polarity protein 3Genealiases: LMO6 · LOAM · LOAS · Pk3

Q-omics provides the consensus-scored PRICKLE3 profile across patient tissues and cancer cell-line models. PRICKLE3 expression is associated with patient survival in 23 of 34 cancer types, with the highest sampling consensus in KICH. Among the 18 cancer types available for tumor–normal comparison, PRICKLE3 is differentially expressed in 17, with the highest sampling consensus in COAD. Additionally, PRICKLE3 RNA expression shows 19,272 significant gene co-expression associations, with the highest sampling consensus in KIRP. Together, these results highlight KICH, COAD, and KIRP as cancer lineages where PRICKLE3 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes PRICKLE3 survival associations across molecular data types. PRICKLE3 RNA expression shows survival associations in the most cancer types (23), followed by mutation status (6) and mass-spec protein abundance (4). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
PRICKLE3 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier23KICH (106)view →
MutationKaplan–Meier6BLCA (36)view →
Protein (mass-spec)Kaplan–Meier4LUAD (9)view →
This table ranks reproducible PRICKLE3 RNA expression–survival associations across cancer types. High PRICKLE3 expression shows unfavorable associations in KICH, KIRP, LGG and LIHC, but favorable associations in BLCA and SCLC. The KICH Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify KICH as the clearest survival context for PRICKLE3 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
KICHDFSQuartileII,III,IV0.3430.942<.001106view →
KIRPDFSQuartileAll0.7230.919<.001102view →
LGGDFSMedianAll0.2890.515<.00154view →
BLCAOSMedianIV0.4090.149.00547view →
SCLCOSMedianAll0.4670.235.00439view →
LIHCDFSTertileAll0.3230.512<.00137view →
Pink = unfavorable, green = favorable. all 23 lineages →

PRICKLE3-KICH (DFS)

Kaplan–Meier survival curve for PRICKLE3 RNA expression in KICH: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes PRICKLE3 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 17, while mass-spec protein shows differences in 4. The strongest signals are observed in KIRC for RNA and LSCC for protein.
PRICKLE3 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot17KIRC (11)view →
Protein (mass-spec)Box plot4LSCC (7)view →
This table ranks reproducible tumor–normal expression differences for PRICKLE3. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. PRICKLE3 shows higher tumor expression in COAD, HNSC, KIRC, LIHC, LUAD and LUSC. The COAD box plot shows higher PRICKLE3 RNA expression in tumor versus normal tissue (log2 FC = +1.198, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
COADFemaleAll+1.198<.00111view →
HNSCMaleAll+0.754<.00111view →
KIRCFemaleAll+0.577<.00111view →
LIHCFemaleII,III,IV+0.844<.0019view →
LUADFemaleII,III,IV+0.726<.0019view →
LUSCMaleAll+1.379<.0018view →
Green = repressed in tumor. all 17 lineages →

PRICKLE3-COAD

Tumor-vs-normal expression box plot for PRICKLE3 in COAD.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with PRICKLE3 in patient tissues and cancer cell lines. In patient samples, PRICKLE3 shows the broadest associations at the RNA and protein expression levels, with KIRP recurring as the lineage with the largest associated feature set. In cancer cell lines, PRICKLE3 RNA and mutation anchors are most strongly linked to RNA-expression features, especially in BREAST, while CRISPR and shRNA rows add functional-dependency signals in OVARY and UPPER_AERODIGESTIVE_TRACT.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA19,272KIRP (6334)view →
Protein (mass-spec)13,716LSCC (5370)view →
Protein (mass-spec)
Protein (mass-spec)6,880GBM (2236)view →
RNA2,310LSCC (996)view →
Mutation
RNA3,937UCEC (3615)view →
Protein (RPPA)29UCEC (29)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR1,602BREAST (165)view →
RNA1,493OVARY (478)view →
RNA
RNA9,189UPPER_AERODIGESTIVE_TRACT (3747)view →
Function (RNA)3,393BLOOD_Lymphoma (990)view →
Mutation
Mutation2,515BLOOD_Leukemia (1626)view →
RNA17LARGE_INTESTINE (14)view →
shRNA
shRNA1,011BREAST (156)view →
CRISPR686SKIN (136)view →