PARP9

associated omics data
poly(ADP-ribose) polymerase family member 9Genealiases: ARTD9 · BAL · BAL1 · MGC:7868

Q-omics provides the consensus-scored PARP9 profile across patient tissues and cancer cell-line models. PARP9 expression is associated with patient survival in 28 of 34 cancer types, with the highest sampling consensus in SKCM. Among the 18 cancer types available for tumor–normal comparison, PARP9 is differentially expressed in 14, with the highest sampling consensus in BLCA. Additionally, PARP9 RNA expression shows 19,232 significant gene co-expression associations, with the highest sampling consensus in UVM. Together, these results highlight SKCM, BLCA, and UVM as cancer lineages where PARP9 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes PARP9 survival associations across molecular data types. PARP9 RNA expression shows survival associations in the most cancer types (28), followed by mutation status (5) and mass-spec protein abundance (6). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
PARP9 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier28SKCM (109)view →
Protein (mass-spec)Kaplan–Meier6COAD (18)view →
MutationKaplan–Meier5BLCA (15)view →
This table ranks reproducible PARP9 RNA expression–survival associations across cancer types. High PARP9 expression shows unfavorable associations in LGG, PAAD, UCEC and LUAD, but favorable associations in SKCM and ESCA. The SKCM Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p < 0.001). Together, the overview and detailed table identify SKCM as the clearest survival context for PARP9 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
SKCMOSMedianAll0.4160.256<.001109view →
LGGOSMedianAll0.7270.898<.00153view →
PAADDFSMedianAll0.2250.494<.00147view →
UCECDFSTertileAll0.5360.742.00846view →
ESCADFSTertileIII,IV0.4970.198<.00135view →
LUADOSQuartileAll0.2210.433<.00129view →
Pink = unfavorable, green = favorable. all 28 lineages →

PARP9-SKCM (OS)

Kaplan–Meier survival curve for PARP9 RNA expression in SKCM: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes PARP9 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 14, while mass-spec protein shows differences in 6. The strongest signals are observed in KIRC for RNA and CCRCC for protein.
PARP9 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot14KIRC (11)view →
Protein (mass-spec)Box plot6CCRCC (12)view →
This table ranks reproducible tumor–normal expression differences for PARP9. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. PARP9 shows higher tumor expression in BLCA, HNSC, KIRC, BRCA, STAD and THCA. The BLCA box plot shows higher PARP9 RNA expression in tumor versus normal tissue (log2 FC = +1.232, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
BLCAMaleIV+1.232<.00111view →
HNSCAllIII,IV+1.030<.00111view →
KIRCFemaleAll+0.861<.00111view →
BRCAAllIII,IV+1.045<.0018view →
STADAllII,III,IV+1.034<.0018view →
THCAMaleAll+0.627<.0018view →
Green = repressed in tumor. all 14 lineages →

PARP9-BLCA

Tumor-vs-normal expression box plot for PARP9 in BLCA.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with PARP9 in patient tissues and cancer cell lines. In patient samples, PARP9 shows the broadest associations at the RNA and protein expression levels, with UVM recurring as the lineage with the largest associated feature set. In cancer cell lines, PARP9 RNA and mutation anchors are most strongly linked to RNA-expression features, especially in KIDNEY, while CRISPR and shRNA rows add functional-dependency signals in OVARY and BLOOD_Leukemia.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA19,232UVM (8520)view →
Protein (mass-spec)9,366CCRCC (1653)view →
Protein (mass-spec)
Protein (mass-spec)15,178GBM (4271)view →
RNA11,220GBM (3544)view →
Mutation
RNA2,443UCEC (1791)view →
Protein (RPPA)38UCEC (33)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR1,754KIDNEY (133)view →
shRNA1,099OVARY (112)view →
RNA
RNA9,505BLOOD_Leukemia (2748)view →
Function (RNA)4,935BONE (1424)view →
Mutation
Mutation3,806LARGE_INTESTINE (2372)view →
RNA15LARGE_INTESTINE (5)view →
shRNA
shRNA1,906LUNG_SCLC (197)view →
RNA1,653BREAST (227)view →