PARP9

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PARP9 mutation is significantly associated with the RNA expression of many other genes, with 2,443 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PARP9-associated genes across cancer lineages are ANKMY2, UBR7, and LARP1B. Each is linked with PARP9 in more than 3 cancer types. Because this analysis shows association rather than direction, both PARP9-to-partner and partner-to-PARP9 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ANKMY2 grouped by PARP9-low versus PARP9-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PARP9→partner) and Y-score (partner→PARP9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECANKMY2 →+0.409+2.545<.001<.00133
UCECUBR7 →+0.321+2.021.007.00133
UCECLARP1B →+0.406+1.638.001.00133
UCECMIR3912 →+0.198+2.053<.001<.00133
UCECUQCRH →+0.664+1.606.004.00133
UCECZBTB8OS →+0.239+1.410.004.00533
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,443 associations by consensus.

ANKMY2 by PARP9 expression — UCEC

Box plot of ANKMY2 in PARP9-low vs PARP9-high samples in UCEC.

Explore this box plot interactively →

Exploration