TREX1

associated omics data
three prime repair exonuclease 1Genealiases: AGS1 · CRV · DRN3 · HERNS · RVCLS

Q-omics provides the consensus-scored TREX1 profile across patient tissues and cancer cell-line models. TREX1 expression is associated with patient survival in 1 of 34 cancer types, with the highest sampling consensus in SCLC. Additionally, TREX1 protein abundance shows 13,132 significant protein co-abundance associations, with the highest sampling consensus in PDAC. Together, these results highlight SCLC, and PDAC as cancer lineages where TREX1 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes TREX1 survival associations across molecular data types. TREX1 RNA expression shows survival associations in the most cancer types (1), followed by mutation status (2) and mass-spec protein abundance (5). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
TREX1 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
Protein (mass-spec)Kaplan–Meier5COAD (18)view →
MutationKaplan–Meier2COAD (9)view →
RNAKaplan–Meier1SCLC (2)view →
This table ranks reproducible TREX1 RNA expression–survival associations across cancer types. High TREX1 expression shows favorable associations in SCLC. The SCLC Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p = .045). Together, the overview and detailed table identify SCLC as the clearest survival context for TREX1 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
SCLCOSMedianAll0.9330.636.0452view →
Pink = unfavorable, green = favorable. all 1 lineages →

TREX1-SCLC (OS)

Kaplan–Meier survival curve for TREX1 RNA expression in SCLC: high vs low expression groups.

Explore this curve interactively →

Cross-omics associations

This table shows molecular features associated with TREX1 in patient tissues and cancer cell lines. In patient samples, TREX1 shows the broadest associations at the RNA and protein expression levels, with PDAC recurring as the lineage with the largest associated feature set. In cancer cell lines, TREX1 RNA and mutation anchors are most strongly linked to RNA-expression features, especially in PANCREAS, while CRISPR and shRNA rows add functional-dependency signals in URINARY_TRACT and SOFT_TISSUE.
Associated data typeStrength (# associated data)Lineage of highest associated data
Protein (mass-spec)
Protein (mass-spec)13,132PDAC (6017)view →
RNA7,532COAD (2608)view →
RNA
RNA878SCLC (878)view →
Function (RNA)556SCLC (556)view →
Mutation
RNA26BLCA (14)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR1,937PANCREAS (292)view →
RNA1,721URINARY_TRACT (333)view →
RNA
RNA7,741SOFT_TISSUE (1744)view →
Function (RNA)3,572SOFT_TISSUE (977)view →
Mutation
Mutation2,720BLOOD_Leukemia (1573)view →
RNA12LARGE_INTESTINE (6)view →
shRNA
RNA1,838CNS (351)view →
shRNA1,569BREAST (160)view →