SIX1

associated omics data
SIX homeobox 1Genealiases: BOS3 · DFNA23 · TIP39

Q-omics provides the consensus-scored SIX1 profile across patient tissues and cancer cell-line models. SIX1 expression is associated with patient survival in 25 of 34 cancer types, with the highest sampling consensus in KIRP. Among the 18 cancer types available for tumor–normal comparison, SIX1 is differentially expressed in 15, with the highest sampling consensus in BLCA. Additionally, SIX1 protein abundance shows 29,341 significant protein co-abundance associations, with the highest sampling consensus in LUAD. Together, these results highlight KIRP, BLCA, and LUAD as cancer lineages where SIX1 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes SIX1 survival associations across molecular data types. SIX1 RNA expression shows survival associations in the most cancer types (25), followed by mutation status (6) and mass-spec protein abundance (9). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
SIX1 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier25KIRP (131)view →
Protein (mass-spec)Kaplan–Meier9HNSC (48)view →
MutationKaplan–Meier6HNSC (48)view →
This table ranks reproducible SIX1 RNA expression–survival associations across cancer types. High SIX1 expression shows unfavorable associations in KIRP, UCEC, ACC and UVM, but favorable associations in LUSC and LUAD. The KIRP Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify KIRP as the clearest survival context for SIX1 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
KIRPOSMedianAll0.5220.810<.001131view →
UCECDFSMedianAll0.5610.734<.00180view →
ACCOSQuartileAll0.3480.955<.00171view →
LUSCOSTertileAll0.8540.734<.00157view →
LUADOSQuartileAll0.4570.172.00145view →
UVMDFSQuartileIII,IV0.2430.793.00344view →
Pink = unfavorable, green = favorable. all 25 lineages →

SIX1-KIRP (OS)

Kaplan–Meier survival curve for SIX1 RNA expression in KIRP: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes SIX1 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 15, while mass-spec protein shows differences in 7. The strongest signals are observed in KIRC for RNA and COAD for protein.
SIX1 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot15KIRC (11)view →
Protein (mass-spec)Box plot7COAD (12)view →
This table ranks reproducible tumor–normal expression differences for SIX1. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. SIX1 shows higher tumor expression in BLCA, KIRC, KIRP, LUAD, LIHC and COAD. The BLCA box plot shows higher SIX1 RNA expression in tumor versus normal tissue (log2 FC = +1.811, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
BLCAMaleIII,IV+1.811<.00111view →
KIRCFemaleAll+0.665<.00111view →
KIRPAllIII,IV+0.622.0049view →
LUADFemaleII,III,IV+1.911<.0018view →
LIHCAllII,III,IV+0.612<.0018view →
COADAllII,III,IV+0.459<.0018view →
Green = repressed in tumor. all 15 lineages →

SIX1-BLCA

Tumor-vs-normal expression box plot for SIX1 in BLCA.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with SIX1 in patient tissues and cancer cell lines. In patient samples, SIX1 shows the broadest associations at the RNA and protein expression levels, with LUAD recurring as the lineage with the largest associated feature set. In cancer cell lines, SIX1 RNA and mutation anchors are most strongly linked to RNA-expression features, especially in LARGE_INTESTINE, while CRISPR and shRNA rows add functional-dependency signals in LUNG_NSCLC_LUAD and SOFT_TISSUE.
Associated data typeStrength (# associated data)Lineage of highest associated data
Protein (mass-spec)
Protein (mass-spec)29,341LUAD (9331)view →
RNA13,389LSCC (5622)view →
RNA
RNA17,859THYM (7438)view →
Protein (mass-spec)15,432HNSC (4365)view →
Mutation
RNA2,696UCEC (2600)view →
Protein (RPPA)20UCEC (20)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
RNA2,136LARGE_INTESTINE (477)view →
CRISPR1,832LUNG_NSCLC_LUAD (117)view →
RNA
RNA7,940SOFT_TISSUE (1717)view →
Function (RNA)3,347SOFT_TISSUE (619)view →
Mutation
Mutation2,338LARGE_INTESTINE (2338)view →
Drug35LARGE_INTESTINE (35)view →
shRNA
RNA1,752BLOOD_Leukemia (510)view →
shRNA1,659BLOOD_Myeloma (165)view →