RFC4

associated omics data
replication factor C subunit 4Genealiases: A1 · MRMNS · RFC37

Q-omics provides the consensus-scored RFC4 profile across patient tissues and cancer cell-line models. RFC4 expression is associated with patient survival in 29 of 34 cancer types, with the highest sampling consensus in ACC. Among the 18 cancer types available for tumor–normal comparison, RFC4 is differentially expressed in 16, with the highest sampling consensus in HNSC. Additionally, RFC4 protein abundance shows 32,937 significant protein co-abundance associations, with the highest sampling consensus in LSCC. Together, these results highlight ACC, HNSC, and LSCC as cancer lineages where RFC4 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes RFC4 survival associations across molecular data types. RFC4 RNA expression shows survival associations in the most cancer types (29), followed by mutation status (3) and mass-spec protein abundance (4). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
RFC4 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier29ACC (127)view →
Protein (mass-spec)Kaplan–Meier4HNSC (51)view →
MutationKaplan–Meier3HNSC (33)view →
This table ranks reproducible RFC4 RNA expression–survival associations across cancer types. High RFC4 expression shows unfavorable associations in ACC, KICH, KIRC, LIHC, KIRP and LUAD. The ACC Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify ACC as the clearest survival context for RFC4 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
ACCDFSMedianAll0.1940.672<.001127view →
KICHOSMedianAll0.7331.000<.001103view →
KIRCDFSQuartileAll0.4720.704<.00192view →
LIHCDFSMedianAll0.4610.621<.00184view →
KIRPDFSMedianAll0.4670.703<.00175view →
LUADOSTertileAll0.7550.877<.00164view →
Pink = unfavorable, green = favorable. all 29 lineages →

RFC4-ACC (DFS)

Kaplan–Meier survival curve for RFC4 RNA expression in ACC: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes RFC4 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 16, while mass-spec protein shows differences in 7. The strongest signals are observed in KIRC for RNA and CCRCC for protein.
RFC4 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot16KIRC (12)view →
Protein (mass-spec)Box plot7CCRCC (11)view →
This table ranks reproducible tumor–normal expression differences for RFC4. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. RFC4 shows higher tumor expression in HNSC, KIRC, LUAD, KIRP, BLCA and COAD. The HNSC box plot shows higher RFC4 RNA expression in tumor versus normal tissue (log2 FC = +2.134, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
HNSCMaleIV+2.134<.00112view →
KIRCMaleIV+1.066<.00112view →
LUADMaleIII,IV+1.923<.00111view →
KIRPAllIV+1.850<.00111view →
BLCAFemaleAll+1.672<.00111view →
COADFemaleII,III,IV+1.421<.00111view →
Green = repressed in tumor. all 16 lineages →

RFC4-HNSC

Tumor-vs-normal expression box plot for RFC4 in HNSC.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with RFC4 in patient tissues and cancer cell lines. In patient samples, RFC4 shows the broadest associations at the RNA and protein expression levels, with LSCC recurring as the lineage with the largest associated feature set. In cancer cell lines, RFC4 RNA and mutation anchors are most strongly linked to RNA-expression features, especially in SKIN, while CRISPR and shRNA rows add functional-dependency signals in URINARY_TRACT and BLOOD_Leukemia.
Associated data typeStrength (# associated data)Lineage of highest associated data
Protein (mass-spec)
Protein (mass-spec)32,937LSCC (14685)view →
RNA19,627LSCC (12435)view →
RNA
Protein (mass-spec)25,497LSCC (10766)view →
RNA19,220ACC (9221)view →
Mutation
RNA234UCEC (171)view →
Protein (RPPA)10UCEC (10)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR2,019SKIN (171)view →
RNA1,861URINARY_TRACT (473)view →
RNA
RNA10,625BLOOD_Leukemia (3774)view →
Function (RNA)5,143BONE (1630)view →
Protein (mass-spec)
RNA6,221BLOOD_Leukemia (3300)view →
Function (mass-spec)2,951BLOOD_Leukemia (904)view →
shRNA
RNA2,307OVARY (570)view →
shRNA2,003UPPER_AERODIGESTIVE_TRACT (270)view →