PGS1

associated omics data
phosphatidylglycerophosphate synthase 1Genealiases: []

Q-omics provides the consensus-scored PGS1 profile across patient tissues and cancer cell-line models. PGS1 expression is associated with patient survival in 27 of 34 cancer types, with the highest sampling consensus in KIRC. Among the 18 cancer types available for tumor–normal comparison, PGS1 is differentially expressed in 15, with the highest sampling consensus in HNSC. Additionally, PGS1 RNA expression shows 20,176 significant gene co-expression associations, with the highest sampling consensus in ACC. Together, these results highlight KIRC, HNSC, and ACC as cancer lineages where PGS1 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes PGS1 survival associations across molecular data types. PGS1 RNA expression shows survival associations in the most cancer types (27), followed by mutation status (4) and mass-spec protein abundance (5). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
PGS1 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier27KIRC (144)view →
Protein (mass-spec)Kaplan–Meier5PDAC (23)view →
MutationKaplan–Meier4UCS (36)view →
This table ranks reproducible PGS1 RNA expression–survival associations across cancer types. High PGS1 expression shows unfavorable associations in KIRC, ACC, LIHC and LGG, but favorable associations in LUAD and HNSC. The KIRC Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify KIRC as the clearest survival context for PGS1 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
KIRCDFSMedianAll0.5520.686<.001144view →
ACCOSTertileII,III,IV0.6100.924<.00181view →
LIHCDFSTertileAll0.4020.607<.00173view →
LUADOSTertileII,III,IV0.8030.601<.00172view →
HNSCDFSTertileIV0.4620.228<.00162view →
LGGDFSMedianAll0.6570.816<.00148view →
Pink = unfavorable, green = favorable. all 27 lineages →

PGS1-KIRC (DFS)

Kaplan–Meier survival curve for PGS1 RNA expression in KIRC: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes PGS1 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 15, while mass-spec protein shows differences in 3. The strongest signals are observed in HNSC for RNA and LUAD for protein.
PGS1 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot15HNSC (12)view →
Protein (mass-spec)Box plot3LUAD (9)view →
This table ranks reproducible tumor–normal expression differences for PGS1. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. PGS1 shows higher tumor expression in HNSC, BLCA, KIRP, KIRC, COAD and LIHC. The HNSC box plot shows higher PGS1 RNA expression in tumor versus normal tissue (log2 FC = +1.021, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
HNSCMaleIII,IV+1.021<.00112view →
BLCAAllIII,IV+0.952<.00111view →
KIRPAllII,III,IV+0.630<.00111view →
KIRCFemaleAll+0.561<.00111view →
COADAllIV+0.704<.00110view →
LIHCFemaleII,III,IV+1.140<.0019view →
Green = repressed in tumor. all 15 lineages →

PGS1-HNSC

Tumor-vs-normal expression box plot for PGS1 in HNSC.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with PGS1 in patient tissues and cancer cell lines. In patient samples, PGS1 shows the broadest associations at the RNA and protein expression levels, with ACC recurring as the lineage with the largest associated feature set. In cancer cell lines, PGS1 RNA and mutation anchors are most strongly linked to RNA-expression features, especially in LUNG_SCLC, while CRISPR and shRNA rows add functional-dependency signals in UPPER_AERODIGESTIVE_TRACT and BLOOD_Leukemia.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA20,176ACC (9970)view →
Protein (mass-spec)7,694PDAC (1464)view →
Protein (mass-spec)
Protein (mass-spec)10,870CCRCC (2640)view →
RNA7,211OV (3023)view →
Mutation
RNA974UCEC (837)view →
Protein (RPPA)30UCEC (27)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR2,259LUNG_SCLC (228)view →
RNA1,879LUNG_SCLC (432)view →
RNA
RNA12,162UPPER_AERODIGESTIVE_TRACT (6159)view →
Function (RNA)4,347BLOOD_Leukemia (1083)view →
shRNA
shRNA2,295OESOPHAGUS (407)view →
RNA2,047SKIN (494)view →
Mutation
Mutation2,268BLOOD_Leukemia (1152)view →
RNA2SKIN (2)view →