NECTIN4

associated omics data
nectin cell adhesion molecule 4Genealiases: EDSS1 · LNIR · PRR4 · PVRL4 · nectin-4

Q-omics provides the consensus-scored NECTIN4 profile across patient tissues and cancer cell-line models. NECTIN4 expression is associated with patient survival in 26 of 34 cancer types, with the highest sampling consensus in KIRC. Among the 18 cancer types available for tumor–normal comparison, NECTIN4 is differentially expressed in 13, with the highest sampling consensus in KIRC. Additionally, NECTIN4 protein abundance shows 16,542 significant protein co-abundance associations, with the highest sampling consensus in LSCC. Together, these results highlight KIRC, and LSCC as cancer lineages where NECTIN4 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes NECTIN4 survival associations across molecular data types. NECTIN4 RNA expression shows survival associations in the most cancer types (26), followed by mutation status (5) and mass-spec protein abundance (4). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
NECTIN4 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier26KIRC (118)view →
MutationKaplan–Meier5LUAD (22)view →
Protein (mass-spec)Kaplan–Meier4UCEC (12)view →
This table ranks reproducible NECTIN4 RNA expression–survival associations across cancer types. High NECTIN4 expression shows unfavorable associations in KIRC, SKCM, ACC, UVM, BRCA and LGG. The KIRC Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify KIRC as the clearest survival context for NECTIN4 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
KIRCDFSMedianAll0.5360.722<.001118view →
SKCMOSMedianAll0.7260.834<.001100view →
ACCOSMedianAll0.7780.955<.00194view →
UVMDFSMedianII,III,IV0.3170.647.00181view →
BRCADFSTertileIII,IV0.8050.931.00170view →
LGGDFSMedianAll0.2710.479<.00148view →
Pink = unfavorable, green = favorable. all 26 lineages →

NECTIN4-KIRC (DFS)

Kaplan–Meier survival curve for NECTIN4 RNA expression in KIRC: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes NECTIN4 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 13, while mass-spec protein shows differences in 5. The strongest signals are observed in KIRC for RNA and LUAD for protein.
NECTIN4 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot13KIRC (12)view →
Protein (mass-spec)Box plot5LUAD (8)view →
This table ranks reproducible tumor–normal expression differences for NECTIN4. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. NECTIN4 shows lower tumor expression in KIRC and KIRP and higher tumor expression in THCA, COAD, LUSC and LUAD. The KIRC box plot shows higher NECTIN4 RNA expression in normal versus tumor tissue (log2 FC = −2.174, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
KIRCFemaleII,III,IV−2.174<.00112view →
THCAMaleIV+4.823<.00111view →
COADAllIV+2.258<.00111view →
LUSCAllIII,IV+3.180<.0019view →
LUADFemaleIII,IV+2.480<.0019view →
KIRPMaleII,III,IV−2.469<.0019view →
Green = repressed in tumor. all 13 lineages →

NECTIN4-KIRC

Tumor-vs-normal expression box plot for NECTIN4 in KIRC.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with NECTIN4 in patient tissues and cancer cell lines. In patient samples, NECTIN4 shows the broadest associations at the RNA and protein expression levels, with LSCC recurring as the lineage with the largest associated feature set. In cancer cell lines, NECTIN4 RNA and mutation anchors are most strongly linked to RNA-expression features, especially in URINARY_TRACT, while CRISPR and shRNA rows add functional-dependency signals in BREAST and LUNG_NSCLC_LUAD.
Associated data typeStrength (# associated data)Lineage of highest associated data
Protein (mass-spec)
Protein (mass-spec)16,542LSCC (7524)view →
RNA15,519LSCC (6285)view →
RNA
Protein (mass-spec)15,880LSCC (6262)view →
RNA15,282THYM (3678)view →
Mutation
RNA1,350UCEC (853)view →
Protein (RPPA)18UCEC (15)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR1,870URINARY_TRACT (148)view →
RNA1,836URINARY_TRACT (455)view →
RNA
RNA7,343BREAST (2239)view →
Function (RNA)4,115LUNG_NSCLC_LUAD (1032)view →
Mutation
Mutation3,046LARGE_INTESTINE (1755)view →
RNA37LARGE_INTESTINE (21)view →
shRNA
shRNA1,779SKIN (177)view →
RNA1,701BLOOD_Leukemia (548)view →