LMNB1

associated omics data
lamin B1Genealiases: ADLD · LMN · LMN2 · LMNB · MCPH26

Q-omics provides the consensus-scored LMNB1 profile across patient tissues and cancer cell-line models. LMNB1 expression is associated with patient survival in 29 of 34 cancer types, with the highest sampling consensus in KIRP. Among the 18 cancer types available for tumor–normal comparison, LMNB1 is differentially expressed in 17, with the highest sampling consensus in KIRC. Additionally, LMNB1 protein abundance shows 28,968 significant protein co-abundance associations, with the highest sampling consensus in GBM. Together, these results highlight KIRP, KIRC, and GBM as cancer lineages where LMNB1 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes LMNB1 survival associations across molecular data types. LMNB1 RNA expression shows survival associations in the most cancer types (29), followed by mutation status (3) and mass-spec protein abundance (9). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
LMNB1 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier29KIRP (153)view →
Protein (mass-spec)Kaplan–Meier9CCRCC (17)view →
MutationKaplan–Meier3ESCA (36)view →
This table ranks reproducible LMNB1 RNA expression–survival associations across cancer types. High LMNB1 expression shows unfavorable associations in KIRP, ACC, LIHC, KICH, LGG and UVM. The KIRP Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify KIRP as the clearest survival context for LMNB1 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
KIRPDFSMedianAll0.7770.921<.001153view →
ACCDFSMedianAll0.1940.679<.001134view →
LIHCDFSMedianAll0.4510.631<.001104view →
KICHOSMedianIII,IV0.3630.957<.00166view →
LGGOSMedianAll0.7440.878<.00151view →
UVMDFSQuartileAll0.3120.812<.00148view →
Pink = unfavorable, green = favorable. all 29 lineages →

LMNB1-KIRP (DFS)

Kaplan–Meier survival curve for LMNB1 RNA expression in KIRP: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes LMNB1 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 17, while mass-spec protein shows differences in 10. The strongest signals are observed in KIRC for RNA and CCRCC for protein.
LMNB1 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot17KIRC (12)view →
Protein (mass-spec)Box plot10CCRCC (11)view →
This table ranks reproducible tumor–normal expression differences for LMNB1. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. LMNB1 shows higher tumor expression in KIRC, BLCA, KIRP, HNSC, LUSC and LUAD. The KIRC box plot shows higher LMNB1 RNA expression in tumor versus normal tissue (log2 FC = +1.560, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
KIRCFemaleII,III,IV+1.560<.00112view →
BLCAMaleIII,IV+3.367<.00111view →
KIRPAllIV+3.040<.00111view →
HNSCMaleAll+1.341<.00111view →
LUSCFemaleAll+2.353<.0019view →
LUADMaleIII,IV+2.240<.0019view →
Green = repressed in tumor. all 17 lineages →

LMNB1-KIRC

Tumor-vs-normal expression box plot for LMNB1 in KIRC.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with LMNB1 in patient tissues and cancer cell lines. In patient samples, LMNB1 shows the broadest associations at the RNA and protein expression levels, with GBM recurring as the lineage with the largest associated feature set. In cancer cell lines, LMNB1 RNA and mutation anchors are most strongly linked to RNA-expression features, especially in BLOOD_Lymphoma, while CRISPR and shRNA rows add functional-dependency signals in BLOOD_Leukemia and CNS.
Associated data typeStrength (# associated data)Lineage of highest associated data
Protein (mass-spec)
Protein (mass-spec)28,968GBM (14241)view →
RNA16,377GBM (6979)view →
RNA
Protein (mass-spec)26,073LSCC (9301)view →
RNA19,215ACC (8582)view →
Mutation
RNA1,588UCEC (1526)view →
Protein (RPPA)23UCEC (23)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR1,823BLOOD_Lymphoma (223)view →
RNA1,329BLOOD_Lymphoma (352)view →
RNA
RNA10,468BLOOD_Leukemia (5229)view →
Function (RNA)4,538BLOOD_Leukemia (1780)view →
Protein (mass-spec)
RNA3,259BLOOD_Leukemia (649)view →
Protein (mass-spec)1,932CNS (550)view →
Mutation
Mutation2,338LARGE_INTESTINE (2070)view →
RNA13SOFT_TISSUE (8)view →