LMNB1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LMNB1 mutation is significantly associated with the total protein of many other genes, with 23 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LMNB1-associated genes across cancer lineages are ATM, 14-3-3_beta, and ERK2. Each is linked with LMNB1 in more than 1 cancer types. Because this analysis shows association rather than direction, both LMNB1-to-partner and partner-to-LMNB1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ATM grouped by LMNB1-low versus LMNB1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LMNB1→partner) and Y-score (partner→LMNB1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECATM →-0.520-3.571.002.00232
UCEC14-3-3_beta →-0.107-2.558.005.01031
UCECERK2 →+0.220+2.584.002.00131
UCECFOXO3a →-0.087-1.861.025.04931
UCECHeregulin →-0.133-3.308.004.00931
UCECJNK_pT183_Y185 →-0.160-2.459.013.01931
Each partner links to its Q-omics profile. Showing the 6 strongest of 23 associations by consensus.

ATM by LMNB1 expression — UCEC

Box plot of ATM in LMNB1-low vs LMNB1-high samples in UCEC.

Explore this box plot interactively →

Exploration