Negative regulation of cell adhesion molecule production

associated omics data
GO:0060354Ontology (GO BP)GO biological process · ~12 member genes

Q-omics provides the Negative regulation of cell adhesion molecule production (GO:0060354) pathway profile, scoring each patient from the combined activity of its roughly 12 member genes. Pathway activity is associated with patient survival in 23 of 34 cancer types, with the highest sampling consensus in STAD. Among the 18 cancer types available for tumor–normal comparison, the pathway is differentially active in 11, with the highest sampling consensus in KICH. Additionally, pathway RNA activity shows 26,447 significant cross-omics associations, again with the highest sampling consensus in TGCT. Together, these results highlight STAD, KICH, and TGCT as cancer lineages where the pathway shows reproducible signals across outcome, tissue activity, and molecular association analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns. Pathway-against-pathway and pathway-against-mutation comparisons are not available for ontology entities.

Survival associations

This table summarizes Negative regulation of cell adhesion molecule production survival associations by molecular data type. RNA-level pathway activity shows survival associations in the most cancer types (23). The rightmost column indicates the cancer type with the highest sampling consensus for each layer.
Data typeSurvival analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Kaplan–Meier23STAD (58)view →
GO function (Protein (mass-spec))Kaplan–Meier5HNSC (5)view →
This table ranks reproducible pathway activity–survival associations across cancer types. High Negative regulation of cell adhesion molecule production activity shows unfavorable associations in STAD, MESO, CESC, ACC, SKCM and LUAD. In the STAD Kaplan–Meier curve the high-activity group declines faster, consistent with the unfavorable association (log-rank p < 0.001). STAD ranks highest by sampling consensus for Negative regulation of cell adhesion molecule production.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
STADDFSQuartileII,III,IV0.2440.561<.00158view →
MESOOSMedianIII,IV0.2240.709.00143view →
CESCOSQuartileAll0.4150.707.00338view →
ACCDFSQuartileAll0.1920.700.01537view →
SKCMDFSQuartileAll0.5080.664.00337view →
LUADDFSTertileIII,IV0.2810.635.01237view →
Pink = unfavorable, green = favorable. all 23 lineages →

Negative regulation of cell adhesion molecule production-STAD (DFS)

Kaplan–Meier survival curve for Negative regulation of cell adhesion molecule production pathway activity in STAD: high vs low activity groups.

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Tumor vs Normal activity

This table summarizes Negative regulation of cell adhesion molecule production tumor–normal activity differences by data type. RNA-level activity shows significant tumor–normal differences in 11 cancer types, while mass-spec protein activity shows differences in 1. The strongest signals are in KICH for RNA and LSCC for protein.
Data typeActivity analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Box plot11KICH (9)view →
GO function (Protein (mass-spec))Box plot1LSCC (4)view →
This table ranks reproducible tumor–normal activity differences for the pathway. A positive fold-change indicates higher activity in tumor tissue. The pathway shows higher tumor activity across KICH, KIRC, HNSC, COAD and PAAD and lower tumor activity in BLCA. In the KICH box plot, tumor samples show higher pathway activity than matched normal samples (log2 FC = +0.096, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
KICHFemaleAll+0.096<.0019view →
KIRCAllAll+0.046<.0016view →
BLCAFemaleIII,IV−0.081.0175view →
HNSCMaleII,III,IV+0.066.0024view →
COADAllAll+0.033.0063view →
PAADFemaleAll+0.074.0212view →
Pink = higher activity in tumor. all 11 lineages →

Negative regulation of cell adhesion molecule production-KICH

Tumor-vs-normal pathway-activity box plot for Negative regulation of cell adhesion molecule production in KICH.

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Cross-omics associations

This table shows molecular features associated with Negative regulation of cell adhesion molecule production pathway activity in patient tissues and cancer cell lines. In patient samples, pathway activity is most strongly linked to RNA and protein features, with the largest associated set in TGCT. In cancer cell lines, RNA-expression features and functional dependencies dominate, with the largest set in LUNG_SCLC.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA26,447TGCT (8395)view →
Protein (mass-spec)9,117GBM (2054)view →
Protein (mass-spec)
Protein (mass-spec)13,069UCEC (3209)view →
RNA940HNSC (269)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR1,498LUNG_SCLC (156)view →
RNA1,446URINARY_TRACT (365)view →
RNA
RNA5,899OVARY (1015)view →
CRISPR1,748LIVER (172)view →
shRNA
shRNA1,843SKIN (291)view →
RNA1,754SKIN (516)view →
Protein (mass-spec)
RNA279SKIN (279)view →
CRISPR173SKIN (173)view →