Extracellular matrix disassembly

associated omics data
GO:0022617Ontology (GO BP)GO biological process · ~64 member genes

Q-omics provides the Extracellular matrix disassembly (GO:0022617) pathway profile, scoring each patient from the combined activity of its roughly 64 member genes. Pathway activity is associated with patient survival in 22 of 34 cancer types, with the highest sampling consensus in STAD. Among the 18 cancer types available for tumor–normal comparison, the pathway is differentially active in 11, with the highest sampling consensus in HNSC. Additionally, pathway RNA activity shows 36,029 significant cross-omics associations, again with the highest sampling consensus in STAD. Together, these results highlight STAD, and HNSC as cancer lineages where the pathway shows reproducible signals across outcome, tissue activity, and molecular association analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns. Pathway-against-pathway and pathway-against-mutation comparisons are not available for ontology entities.

Survival associations

This table summarizes Extracellular matrix disassembly survival associations by molecular data type. RNA-level pathway activity shows survival associations in the most cancer types (22). The rightmost column indicates the cancer type with the highest sampling consensus for each layer.
Data typeSurvival analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Kaplan–Meier22STAD (118)view →
GO function (Protein (mass-spec))Kaplan–Meier6PDAC (52)view →
This table ranks reproducible pathway activity–survival associations across cancer types. High Extracellular matrix disassembly activity shows favorable associations in SCLC and UCS, but unfavorable associations in STAD, LGG, KIRC and UVM. In the STAD Kaplan–Meier curve the high-activity group declines faster, consistent with the unfavorable association (log-rank p < 0.001). STAD ranks highest by sampling consensus for Extracellular matrix disassembly.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
STADDFSMedianAll0.5760.732<.001118view →
LGGDFSMedianAll0.6490.815<.00153view →
KIRCDFSQuartileAll0.5430.742<.00142view →
SCLCDFSQuartileAll0.7620.381<.00134view →
UVMOSQuartileAll0.4700.869.00833view →
UCSDFSTertileIV0.8210.239.02424view →
Pink = unfavorable, green = favorable. all 22 lineages →

Extracellular matrix disassembly-STAD (DFS)

Kaplan–Meier survival curve for Extracellular matrix disassembly pathway activity in STAD: high vs low activity groups.

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Tumor vs Normal activity

This table summarizes Extracellular matrix disassembly tumor–normal activity differences by data type. RNA-level activity shows significant tumor–normal differences in 11 cancer types, while mass-spec protein activity shows differences in 3. The strongest signals are in HNSC for RNA and PDAC for protein.
Data typeActivity analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Box plot11HNSC (12)view →
GO function (Protein (mass-spec))Box plot3PDAC (8)view →
This table ranks reproducible tumor–normal activity differences for the pathway. A positive fold-change indicates higher activity in tumor tissue. The pathway shows higher tumor activity across HNSC, COAD, STAD, CHOL and READ and lower tumor activity in KICH. In the HNSC box plot, tumor samples show higher pathway activity than matched normal samples (log2 FC = +0.116, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
HNSCFemaleIV+0.116<.00112view →
COADFemaleAll+0.042<.00110view →
KICHFemaleAll−0.047<.0018view →
STADMaleAll+0.058<.0014view →
CHOLAllAll+0.055<.0013view →
READAllAll+0.048.0073view →
Pink = higher activity in tumor. all 11 lineages →

Extracellular matrix disassembly-HNSC

Tumor-vs-normal pathway-activity box plot for Extracellular matrix disassembly in HNSC.

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Cross-omics associations

This table shows molecular features associated with Extracellular matrix disassembly pathway activity in patient tissues and cancer cell lines. In patient samples, pathway activity is most strongly linked to RNA and protein features, with the largest associated set in STAD. In cancer cell lines, RNA-expression features and functional dependencies dominate, with the largest set in LUNG_SCLC.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA36,029STAD (20113)view →
Protein (mass-spec)18,230LSCC (6917)view →
Protein (mass-spec)
Protein (mass-spec)20,357LSCC (4354)view →
RNA10,099UCEC (2730)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR1,917LUNG_SCLC (145)view →
shRNA1,374BONE (129)view →
RNA
RNA10,000BLOOD_Leukemia (3381)view →
shRNA2,127BREAST (470)view →
shRNA
RNA2,094BONE (449)view →
shRNA2,028SOFT_TISSUE (184)view →
Protein (mass-spec)
RNA1,949STOMACH (416)view →
Protein (mass-spec)1,465BONE (667)view →