SPTA1

associated omics data
spectrin alpha, erythrocytic 1Genealiases: EL2 · HPP · HS3 · SPH3 · SPTA

Q-omics provides the consensus-scored SPTA1 profile across patient tissues and cancer cell-line models. SPTA1 expression is associated with patient survival in 24 of 34 cancer types, with the highest sampling consensus in KIRP. Among the 18 cancer types available for tumor–normal comparison, SPTA1 is differentially expressed in 8, with the highest sampling consensus in KIRC. Additionally, SPTA1 protein abundance shows 15,167 significant protein co-abundance associations, with the highest sampling consensus in CCRCC. Together, these results highlight KIRP, KIRC, and CCRCC as cancer lineages where SPTA1 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes SPTA1 survival associations across molecular data types. SPTA1 RNA expression shows survival associations in the most cancer types (24), followed by mutation status (13) and mass-spec protein abundance (5). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
SPTA1 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier24KIRP (67)view →
MutationKaplan–Meier13ACC (29)view →
Protein (mass-spec)Kaplan–Meier5CCRCC (34)view →
This table ranks reproducible SPTA1 RNA expression–survival associations across cancer types. High SPTA1 expression shows unfavorable associations in KIRP, BLCA, LUSC and ACC, but favorable associations in PCPG and STAD. The KIRP Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify KIRP as the clearest survival context for SPTA1 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
KIRPDFSMedianAll0.4160.700<.00167view →
BLCADFSMedianAll0.4290.588<.00137view →
LUSCOSTertileAll0.3450.568.00730view →
ACCOSQuartileII,III,IV0.4370.855.01225view →
PCPGDFSMedianAll0.9900.875.00217view →
STADDFSTertileIV0.8350.288.02815view →
Pink = unfavorable, green = favorable. all 24 lineages →

SPTA1-KIRP (DFS)

Kaplan–Meier survival curve for SPTA1 RNA expression in KIRP: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes SPTA1 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 8, while mass-spec protein shows differences in 7. The strongest signals are observed in KIRC for RNA and COAD for protein.
SPTA1 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot8KIRC (6)view →
Protein (mass-spec)Box plot7COAD (12)view →
This table ranks reproducible tumor–normal expression differences for SPTA1. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. SPTA1 shows lower tumor expression in BRCA and UCEC and higher tumor expression in KIRC, STAD, LIHC and HNSC. The KIRC box plot shows higher SPTA1 RNA expression in tumor versus normal tissue (log2 FC = +0.137, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
KIRCMaleAll+0.137<.0016view →
BRCAAllII,III,IV−0.158<.0014view →
STADMaleII,III,IV+0.024.0034view →
LIHCFemaleII,III,IV+0.053.0233view →
HNSCFemaleAll+0.021.0103view →
UCECAllAll−0.115.0142view →
Green = repressed in tumor. all 8 lineages →

SPTA1-KIRC

Tumor-vs-normal expression box plot for SPTA1 in KIRC.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with SPTA1 in patient tissues and cancer cell lines. In patient samples, SPTA1 shows the broadest associations at the RNA and protein expression levels, with CCRCC recurring as the lineage with the largest associated feature set. In cancer cell lines, SPTA1 RNA and mutation anchors are most strongly linked to RNA-expression features, especially in PANCREAS, while CRISPR and shRNA rows add functional-dependency signals in SOFT_TISSUE and BLOOD_Leukemia.
Associated data typeStrength (# associated data)Lineage of highest associated data
Protein (mass-spec)
Protein (mass-spec)15,167CCRCC (6367)view →
RNA3,625UCEC (1329)view →
RNA
RNA14,615UVM (5570)view →
Function (RNA)7,116STAD (5895)view →
Mutation
RNA10,732UCEC (4193)view →
Protein (RPPA)107UCEC (37)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR1,959PANCREAS (242)view →
RNA1,681SOFT_TISSUE (261)view →
RNA
RNA3,911BLOOD_Leukemia (2546)view →
Function (RNA)1,522BLOOD_Leukemia (998)view →
Mutation
Mutation3,876LARGE_INTESTINE (3139)view →
RNA823LARGE_INTESTINE (438)view →
shRNA
shRNA1,872KIDNEY (224)view →
RNA1,782KIDNEY (511)view →