PSMD3

associated omics data
proteasome 26S subunit, non-ATPase 3Genealiases: P58 · RPN3 · S3 · TSTA2

Q-omics provides the consensus-scored PSMD3 profile across patient tissues and cancer cell-line models. PSMD3 expression is associated with patient survival in 25 of 34 cancer types, with the highest sampling consensus in KIRP. Among the 18 cancer types available for tumor–normal comparison, PSMD3 is differentially expressed in 18, with the highest sampling consensus in HNSC. Additionally, PSMD3 protein abundance shows 23,001 significant protein co-abundance associations, with the highest sampling consensus in LSCC. Together, these results highlight KIRP, HNSC, and LSCC as cancer lineages where PSMD3 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes PSMD3 survival associations across molecular data types. PSMD3 RNA expression shows survival associations in the most cancer types (25), followed by mutation status (5) and mass-spec protein abundance (6). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
PSMD3 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier25KIRP (156)view →
Protein (mass-spec)Kaplan–Meier6PDAC (30)view →
MutationKaplan–Meier5BLCA (12)view →
This table ranks reproducible PSMD3 RNA expression–survival associations across cancer types. High PSMD3 expression shows unfavorable associations in KIRP, MESO, UVM, LIHC, ACC and KICH. The KIRP Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify KIRP as the clearest survival context for PSMD3 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
KIRPOSTertileAll0.8480.975<.001156view →
MESOOSMedianIII,IV0.4020.710<.001122view →
UVMDFSTertileII,III,IV0.4000.756<.001104view →
LIHCDFSMedianAll0.4640.616<.00164view →
ACCDFSTertileAll0.1670.685<.00161view →
KICHOSQuartileAll0.5561.000.00151view →
Pink = unfavorable, green = favorable. all 25 lineages →

PSMD3-KIRP (OS)

Kaplan–Meier survival curve for PSMD3 RNA expression in KIRP: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes PSMD3 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 18, while mass-spec protein shows differences in 8. The strongest signals are observed in KIRC for RNA and CCRCC for protein.
PSMD3 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot18KIRC (12)view →
Protein (mass-spec)Box plot8CCRCC (11)view →
This table ranks reproducible tumor–normal expression differences for PSMD3. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. PSMD3 shows higher tumor expression in HNSC, KIRC, BLCA, COAD, KIRP and LUAD. The HNSC box plot shows higher PSMD3 RNA expression in tumor versus normal tissue (log2 FC = +0.995, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
HNSCMaleIV+0.995<.00112view →
KIRCFemaleAll+0.590<.00112view →
BLCAFemaleAll+0.987<.00111view →
COADMaleIV+0.891<.00111view →
KIRPAllII,III,IV+0.728<.00111view →
LUADMaleIII,IV+0.653<.00111view →
Green = repressed in tumor. all 18 lineages →

PSMD3-HNSC

Tumor-vs-normal expression box plot for PSMD3 in HNSC.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with PSMD3 in patient tissues and cancer cell lines. In patient samples, PSMD3 shows the broadest associations at the RNA and protein expression levels, with LSCC recurring as the lineage with the largest associated feature set. In cancer cell lines, PSMD3 RNA and mutation anchors are most strongly linked to RNA-expression features, especially in PANCREAS, while CRISPR and shRNA rows add functional-dependency signals in BLOOD_Leukemia and URINARY_TRACT.
Associated data typeStrength (# associated data)Lineage of highest associated data
Protein (mass-spec)
Protein (mass-spec)23,001LSCC (7572)view →
RNA15,061LSCC (7088)view →
RNA
RNA19,188ACC (9889)view →
Protein (mass-spec)17,410LSCC (10991)view →
Mutation
RNA1,062UCEC (935)view →
Protein (RPPA)7UCEC (7)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR2,066PANCREAS (210)view →
RNA1,582PANCREAS (194)view →
RNA
RNA9,408BLOOD_Leukemia (4779)view →
Function (RNA)3,445BLOOD_Leukemia (1300)view →
Protein (mass-spec)
RNA2,946URINARY_TRACT (617)view →
Function (mass-spec)2,668CNS (729)view →
Mutation
Mutation1,920BLOOD_Leukemia (1694)view →
RNA4BLOOD_Leukemia (3)view →