POLR2A

associated omics data
Gene

Q-omics provides the consensus-scored POLR2A profile across patient tissues and cancer cell-line models. POLR2A expression is associated with patient survival in 24 of 34 cancer types, with the highest sampling consensus in KIRC. Among the 18 cancer types available for tumor–normal comparison, POLR2A is differentially expressed in 10, with the highest sampling consensus in HNSC. Additionally, POLR2A protein abundance shows 30,279 significant protein co-abundance associations, with the highest sampling consensus in GBM. Together, these results highlight KIRC, HNSC, and GBM as cancer lineages where POLR2A shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes POLR2A survival associations across molecular data types. POLR2A RNA expression shows survival associations in the most cancer types (24), followed by mutation status (9) and mass-spec protein abundance (5). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
POLR2A data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier24KIRC (90)view →
MutationKaplan–Meier9UCEC (22)view →
Protein (mass-spec)Kaplan–Meier5LSCC (29)view →
This table ranks reproducible POLR2A RNA expression–survival associations across cancer types. High POLR2A expression shows unfavorable associations in ACC, SKCM and LUSC, but favorable associations in KIRC, SCLC and BRCA. The KIRC Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p < 0.001). Together, the overview and detailed table identify KIRC as the clearest survival context for POLR2A RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
KIRCOSMedianAll0.7090.558<.00190view →
ACCDFSMedianAll0.1930.625<.00146view →
SCLCOSQuartileAll0.8530.529.00246view →
SKCMOSMedianIII,IV0.2600.607.00130view →
BRCADFSTertileIII,IV0.6300.283.00326view →
LUSCDFSQuartileIII,IV0.2270.935.00125view →
Pink = unfavorable, green = favorable. all 24 lineages →

POLR2A-KIRC (OS)

Kaplan–Meier survival curve for POLR2A RNA expression in KIRC: high vs low expression groups.

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Tumor vs Normal expression

This table summarizes POLR2A tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 10, while mass-spec protein shows differences in 6. The strongest signals are observed in HNSC for RNA and HNSC for protein.
POLR2A data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot10HNSC (10)view →
Protein (mass-spec)Box plot6HNSC (11)view →
This table ranks reproducible tumor–normal expression differences for POLR2A. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. POLR2A shows lower tumor expression in KICH and higher tumor expression in HNSC, STAD, CHOL, LUSC and LIHC. The HNSC box plot shows higher POLR2A RNA expression in tumor versus normal tissue (log2 FC = +0.814, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
HNSCMaleAll+0.814<.00110view →
STADAllII,III,IV+0.849.0047view →
KICHMaleAll−0.897<.0016view →
CHOLMaleAll+2.086<.0015view →
LUSCAllAll+0.510<.0015view →
LIHCAllAll+0.488<.0014view →
Green = repressed in tumor. all 10 lineages →

POLR2A-HNSC

Tumor-vs-normal expression box plot for POLR2A in HNSC.

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Cross-omics associations

This table shows molecular features associated with POLR2A in patient tissues and cancer cell lines. In patient samples, POLR2A shows the broadest associations at the RNA and protein expression levels, with GBM recurring as the lineage with the largest associated feature set. In cancer cell lines, POLR2A RNA and mutation anchors are most strongly linked to RNA-expression features, especially in BLOOD_Leukemia, while CRISPR and shRNA rows add functional-dependency signals in LARGE_INTESTINE and OVARY.
Associated data typeStrength (# associated data)Lineage of highest associated data
Protein (mass-spec)
Protein (mass-spec)30,279GBM (11107)view →
RNA16,272LSCC (7512)view →
RNA
RNA20,051ACC (10223)view →
Protein (mass-spec)9,990BRCA (2804)view →
Mutation
RNA5,810UCEC (4199)view →
Protein (RPPA)64UCEC (38)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA11,794BLOOD_Leukemia (6099)view →
Function (RNA)4,671BLOOD_Leukemia (1767)view →
Mutation
Mutation5,062LARGE_INTESTINE (2736)view →
RNA1,407LARGE_INTESTINE (1355)view →
Protein (mass-spec)
RNA4,347BLOOD_Leukemia (1409)view →
Function (RNA)2,320BLOOD_Leukemia (676)view →
shRNA
RNA2,008OVARY (480)view →
shRNA1,459SKIN (230)view →