PHYH

associated omics data
phytanoyl-CoA 2-hydroxylaseGenealiases: LN1 · LNAP1 · PAHX · PHYH1 · RD

Q-omics provides the consensus-scored PHYH profile across patient tissues and cancer cell-line models. PHYH expression is associated with patient survival in 21 of 34 cancer types, with the highest sampling consensus in KIRC. Among the 18 cancer types available for tumor–normal comparison, PHYH is differentially expressed in 10, with the highest sampling consensus in COAD. Additionally, PHYH RNA expression shows 18,553 significant gene co-expression associations, with the highest sampling consensus in UVM. Together, these results highlight KIRC, COAD, and UVM as cancer lineages where PHYH shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes PHYH survival associations across molecular data types. PHYH RNA expression shows survival associations in the most cancer types (21), followed by mutation status (3) and mass-spec protein abundance (4). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
PHYH data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier21KIRC (99)view →
Protein (mass-spec)Kaplan–Meier4CCRCC (30)view →
MutationKaplan–Meier3CESC (30)view →
This table ranks reproducible PHYH RNA expression–survival associations across cancer types. High PHYH expression shows unfavorable associations in SCLC, UVM and HNSC, but favorable associations in KIRC, SKCM and KIRP. The KIRC Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p < 0.001). Together, the overview and detailed table identify KIRC as the clearest survival context for PHYH RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
KIRCOSMedianAll0.7260.525<.00199view →
SCLCOSMedianII,III,IV0.4970.879<.00197view →
UVMDFSTertileAll0.2990.802<.00157view →
SKCMDFSTertileII,III,IV0.2910.148<.00143view →
HNSCOSMedianAll0.2680.526<.00142view →
KIRPOSQuartileII,III,IV0.7770.361.00141view →
Pink = unfavorable, green = favorable. all 21 lineages →

PHYH-KIRC (OS)

Kaplan–Meier survival curve for PHYH RNA expression in KIRC: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes PHYH tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 10, while mass-spec protein shows differences in 6. The strongest signals are observed in THCA for RNA and CCRCC for protein.
PHYH data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot10THCA (10)view →
Protein (mass-spec)Box plot6CCRCC (12)view →
This table ranks reproducible tumor–normal expression differences for PHYH. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. PHYH shows lower tumor expression in COAD, KIRP, THCA, KIRC, HNSC and BRCA. The COAD box plot shows higher PHYH RNA expression in normal versus tumor tissue (log2 FC = −1.375, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
COADAllIV−1.375<.00110view →
KIRPAllIII,IV−1.101<.00110view →
THCAMaleAll−0.775<.00110view →
KIRCMaleAll−0.894<.0018view →
HNSCAllAll−0.912.0016view →
BRCAFemaleAll−0.391<.0016view →
Green = repressed in tumor. all 10 lineages →

PHYH-COAD

Tumor-vs-normal expression box plot for PHYH in COAD.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with PHYH in patient tissues and cancer cell lines. In patient samples, PHYH shows the broadest associations at the RNA and protein expression levels, with UVM recurring as the lineage with the largest associated feature set. In cancer cell lines, PHYH RNA and mutation anchors are most strongly linked to RNA-expression features, especially in BLOOD_Leukemia, while CRISPR and shRNA rows add functional-dependency signals in PANCREAS and BLOOD_Lymphoma.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA18,553UVM (8054)view →
Protein (mass-spec)8,389CCRCC (2245)view →
Protein (mass-spec)
Protein (mass-spec)11,273CCRCC (2926)view →
RNA9,118HNSC (3778)view →
Mutation
RNA825UCEC (734)view →
Protein (RPPA)15UCEC (15)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
RNA1,833BLOOD_Leukemia (655)view →
CRISPR1,713PANCREAS (167)view →
RNA
RNA7,519BLOOD_Lymphoma (1496)view →
Function (RNA)3,383BLOOD_Lymphoma (794)view →
shRNA
shRNA1,552CNS (157)view →
CRISPR1,503LUNG_SCLC (148)view →
Protein (mass-spec)
CRISPR1,216OVARY (155)view →
RNA1,141LUNG_NSCLC_LUAD (203)view →