PDZRN4

associated omics data
PDZ domain containing ring finger 4Genealiases: LNX4 · SAMCAP3L

Q-omics provides the consensus-scored PDZRN4 profile across patient tissues and cancer cell-line models. PDZRN4 expression is associated with patient survival in 21 of 34 cancer types, with the highest sampling consensus in THCA. Among the 18 cancer types available for tumor–normal comparison, PDZRN4 is differentially expressed in 15, with the highest sampling consensus in COAD. Additionally, PDZRN4 RNA expression shows 18,958 significant protein co-abundance associations, with the highest sampling consensus in GBM. Together, these results highlight THCA, COAD, and GBM as cancer lineages where PDZRN4 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes PDZRN4 survival associations across molecular data types. PDZRN4 RNA expression shows survival associations in the most cancer types (21), followed by mutation status (6). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
PDZRN4 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier21THCA (46)view →
MutationKaplan–Meier6CESC (30)view →
This table ranks reproducible PDZRN4 RNA expression–survival associations across cancer types. High PDZRN4 expression shows unfavorable associations in BLCA, but favorable associations in THCA, KIRC, HNSC, ESCA and BRCA. The THCA Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p < 0.001). Together, the overview and detailed table identify THCA as the clearest survival context for PDZRN4 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
THCADFSTertileAll0.9710.612<.00146view →
BLCAOSTertileAll0.3240.593.00443view →
KIRCOSMedianAll0.7110.559.00135view →
HNSCDFSTertileIV0.7610.570.00224view →
ESCAOSQuartileIII,IV0.7960.456.02223view →
BRCAOSMedianIV0.7570.332.01021view →
Pink = unfavorable, green = favorable. all 21 lineages →

PDZRN4-THCA (DFS)

Kaplan–Meier survival curve for PDZRN4 RNA expression in THCA: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes PDZRN4 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 15. The strongest signals are observed in KIRC for RNA.
PDZRN4 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot15KIRC (11)view →
This table ranks reproducible tumor–normal expression differences for PDZRN4. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. PDZRN4 shows lower tumor expression in COAD, KIRC, BLCA, KIRP, UCEC and LUAD. The COAD box plot shows higher PDZRN4 RNA expression in normal versus tumor tissue (log2 FC = −2.273, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
COADMaleII,III,IV−2.273<.00111view →
KIRCMaleII,III,IV−0.976<.00111view →
BLCAMaleIV−4.745<.00110view →
KIRPFemaleAll−0.833<.0019view →
UCECAllIII,IV−2.561<.0018view →
LUADFemaleIII,IV−1.032<.0018view →
Green = repressed in tumor. all 15 lineages →

PDZRN4-COAD

Tumor-vs-normal expression box plot for PDZRN4 in COAD.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with PDZRN4 in patient tissues and cancer cell lines. In patient samples, PDZRN4 shows the broadest associations at the RNA and protein expression levels, with GBM recurring as the lineage with the largest associated feature set. In cancer cell lines, PDZRN4 RNA and mutation anchors are most strongly linked to RNA-expression features, especially in LUNG_NSCLC_LUAD, while CRISPR and shRNA rows add functional-dependency signals in OVARY and LARGE_INTESTINE.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
Protein (mass-spec)18,958GBM (5623)view →
RNA14,924TGCT (5343)view →
Mutation
RNA5,432UCEC (3788)view →
Protein (RPPA)55UCEC (34)view →
Protein (mass-spec)
Protein (mass-spec)373GBM (373)view →
RNA298GBM (298)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR1,831LUNG_NSCLC_LUAD (142)view →
RNA1,101OVARY (162)view →
Mutation
Mutation5,609LARGE_INTESTINE (4713)view →
RNA523LARGE_INTESTINE (419)view →
RNA
RNA3,800BONE (1777)view →
Function (RNA)1,544BONE (922)view →
shRNA
RNA1,818LUNG_SCLC (265)view →
shRNA1,544LUNG_SCLC (167)view →