PDZRN4

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PDZRN4 RNA expression is significantly associated with the protein abundance of many other proteins, with 18,958 significant associations in total. GBM shows the largest number of these associations.

The most reproducible PDZRN4-associated proteins across cancer lineages are ARHGEF17, RAI14, and TAGLN. Each is linked with PDZRN4 in more than 8 cancer types. Because this analysis shows association rather than direction, both PDZRN4-to-partner and partner-to-PDZRN4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PDZRN4 versus ARHGEF17 in CCRCC, with a Pearson correlation of 0.36.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PDZRN4→partner) and Y-score (partner→PDZRN4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CCRCCARHGEF17 →+0.400+0.497<.001<.00139
COADRAI14 →+0.531+1.110<.001<.00139
OVTAGLN →+1.211+0.553<.001<.00139
LSCCVCAN →+1.027+0.631<.001<.00139
BRCASERPINF1 →+0.905+0.679<.001<.00139
UCECCNRIP1 →+0.917+0.544<.001<.00139
Each partner links to its Q-omics profile. Showing the 6 strongest of 18,958 associations by consensus.

PDZRN4 vs ARHGEF17 — CCRCC

Per-sample scatter of PDZRN4 vs ARHGEF17 in CCRCC (Pearson r = 0.36).

Explore this scatter interactively →

Exploration