LINGO2

associated omics data
leucine rich repeat and Ig domain containing 2Genealiases: LERN3 · LRRN6C

Q-omics provides the consensus-scored LINGO2 profile across patient tissues and cancer cell-line models. LINGO2 expression is associated with patient survival in 25 of 34 cancer types, with the highest sampling consensus in UVM. Among the 18 cancer types available for tumor–normal comparison, LINGO2 is differentially expressed in 14, with the highest sampling consensus in KIRC. Additionally, LINGO2 RNA expression shows 14,236 significant gene co-expression associations, with the highest sampling consensus in TGCT. Together, these results highlight UVM, KIRC, and TGCT as cancer lineages where LINGO2 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes LINGO2 survival associations across molecular data types. LINGO2 RNA expression shows survival associations in the most cancer types (25), followed by mutation status (8) and mass-spec protein abundance (1). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
LINGO2 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier25UVM (128)view →
MutationKaplan–Meier8ESCA (48)view →
Protein (mass-spec)Kaplan–Meier1GBM (4)view →
This table ranks reproducible LINGO2 RNA expression–survival associations across cancer types. High LINGO2 expression shows unfavorable associations in BLCA, DLBC, LUAD and UCEC, but favorable associations in UVM and UCS. The UVM Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p < 0.001). Together, the overview and detailed table identify UVM as the clearest survival context for LINGO2 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
UVMOSMedianAll0.7940.357<.001128view →
BLCAOSTertileAll0.3090.512<.00199view →
UCSOSMedianII,III,IV0.6470.218<.00180view →
DLBCDFSTertileII,III,IV0.3700.935.00264view →
LUADOSTertileAll0.2200.401<.00139view →
UCECDFSMedianAll0.5580.729.00336view →
Pink = unfavorable, green = favorable. all 25 lineages →

LINGO2-UVM (OS)

Kaplan–Meier survival curve for LINGO2 RNA expression in UVM: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes LINGO2 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 14. The strongest signals are observed in KIRC for RNA.
LINGO2 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot14KIRC (12)view →
This table ranks reproducible tumor–normal expression differences for LINGO2. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. LINGO2 shows lower tumor expression in KIRC, THCA, BRCA, KICH and UCEC and higher tumor expression in HNSC. The KIRC box plot shows higher LINGO2 RNA expression in normal versus tumor tissue (log2 FC = −0.740, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
KIRCMaleAll−0.740<.00112view →
THCAMaleIII,IV−2.662<.00111view →
HNSCAllAll+0.330<.0018view →
BRCAAllAll−0.163<.0016view →
KICHAllIII,IV−0.768<.0015view →
UCECAllAll−2.102<.0014view →
Green = repressed in tumor. all 14 lineages →

LINGO2-KIRC

Tumor-vs-normal expression box plot for LINGO2 in KIRC.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with LINGO2 in patient tissues and cancer cell lines. In patient samples, LINGO2 shows the broadest associations at the RNA and protein expression levels, with TGCT recurring as the lineage with the largest associated feature set. In cancer cell lines, LINGO2 RNA and mutation anchors are most strongly linked to RNA-expression features, especially in BONE, while CRISPR and shRNA rows add functional-dependency signals in LIVER and LARGE_INTESTINE.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA14,236TGCT (5379)view →
Protein (mass-spec)12,930GBM (6552)view →
Protein (mass-spec)
Protein (mass-spec)7,730GBM (7730)view →
RNA2,037GBM (2037)view →
Mutation
RNA4,217UCEC (2891)view →
Protein (RPPA)54UCEC (43)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
RNA2,147BONE (450)view →
CRISPR1,741LIVER (133)view →
Mutation
Mutation6,708LARGE_INTESTINE (4495)view →
RNA67LUNG_SCLC (29)view →
RNA
RNA5,536BONE (1817)view →
Function (RNA)2,273BONE (684)view →
shRNA
CRISPR990PANCREAS (127)view →
RNA990LUNG_NSCLC_LUAD (227)view →