IGHV3-30

associated omics data
immunoglobulin heavy variable 3-30Genealiases: IGHV330 · VH

Q-omics provides the consensus-scored IGHV3-30 profile across patient tissues and cancer cell-line models. IGHV3-30 expression is associated with patient survival in 25 of 34 cancer types, with the highest sampling consensus in HNSC. Among the 18 cancer types available for tumor–normal comparison, IGHV3-30 is differentially expressed in 5, with the highest sampling consensus in COAD. Additionally, IGHV3-30 RNA expression shows 15,953 significant protein co-abundance associations, with the highest sampling consensus in GBM. Together, these results highlight HNSC, COAD, and GBM as cancer lineages where IGHV3-30 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes IGHV3-30 survival associations across molecular data types. IGHV3-30 RNA expression shows survival associations in the most cancer types (25), followed by mutation status (3) and mass-spec protein abundance (5). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
IGHV3-30 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier25HNSC (144)view →
Protein (mass-spec)Kaplan–Meier5LSCC (14)view →
MutationKaplan–Meier3DLBC (12)view →
This table ranks reproducible IGHV3-30 RNA expression–survival associations across cancer types. High IGHV3-30 expression shows favorable associations in HNSC, SKCM, UCEC, BRCA, LIHC and LUAD. The HNSC Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p < 0.001). Together, the overview and detailed table identify HNSC as the clearest survival context for IGHV3-30 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
HNSCDFSMedianAll0.7610.630<.001144view →
SKCMOSMedianAll0.4070.278<.001133view →
UCECDFSQuartileIII,IV0.6510.327<.00156view →
BRCADFSMedianIII,IV0.6220.359.00439view →
LIHCDFSMedianII,III,IV0.5270.327<.00138view →
LUADDFSTertileII,III,IV0.6180.310.00228view →
Pink = unfavorable, green = favorable. all 25 lineages →

IGHV3-30-HNSC (DFS)

Kaplan–Meier survival curve for IGHV3-30 RNA expression in HNSC: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes IGHV3-30 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 5, while mass-spec protein shows differences in 3. The strongest signals are observed in COAD for RNA and HNSC for protein.
IGHV3-30 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot5COAD (9)view →
Protein (mass-spec)Box plot3HNSC (6)view →
This table ranks reproducible tumor–normal expression differences for IGHV3-30. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. IGHV3-30 shows lower tumor expression in COAD, READ and LIHC and higher tumor expression in KIRC and LUAD. The COAD box plot shows higher IGHV3-30 RNA expression in normal versus tumor tissue (log2 FC = −1.770, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
COADFemaleAll−1.770<.0019view →
KIRCMaleAll+2.112<.0018view →
LUADFemaleAll+2.032<.0017view →
READAllAll−2.903.0032view →
LIHCMaleAll−2.458<.0012view →
Green = repressed in tumor. all 5 lineages →

IGHV3-30-COAD

Tumor-vs-normal expression box plot for IGHV3-30 in COAD.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with IGHV3-30 in patient tissues and cancer cell lines. In patient samples, IGHV3-30 shows the broadest associations at the RNA and protein expression levels, with GBM recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
Protein (mass-spec)15,953GBM (5158)view →
RNA10,992PAAD (2970)view →
Protein (mass-spec)
Protein (mass-spec)12,909CCRCC (3284)view →
RNA5,229GBM (1813)view →
Mutation
RNA24SKCM (20)view →
Infiltrating cells1SKCM (1)view →