C1GALT1C1

associated omics data
Gene

Q-omics provides the consensus-scored C1GALT1C1 profile across patient tissues and cancer cell-line models. C1GALT1C1 expression is associated with patient survival in 23 of 34 cancer types, with the highest sampling consensus in UVM. Among the 18 cancer types available for tumor–normal comparison, C1GALT1C1 is differentially expressed in 13, with the highest sampling consensus in KICH. Additionally, C1GALT1C1 RNA expression shows 19,020 significant gene co-expression associations, with the highest sampling consensus in UVM. Together, these results highlight UVM, and KICH as cancer lineages where C1GALT1C1 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes C1GALT1C1 survival associations across molecular data types. C1GALT1C1 RNA expression shows survival associations in the most cancer types (23), followed by mutation status (1) and mass-spec protein abundance (7). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
C1GALT1C1 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier23UVM (95)view →
Protein (mass-spec)Kaplan–Meier7LSCC (22)view →
MutationKaplan–Meier1STAD (6)view →
This table ranks reproducible C1GALT1C1 RNA expression–survival associations across cancer types. High C1GALT1C1 expression shows unfavorable associations in UVM, KIRP and LGG, but favorable associations in KIRC, THCA and SKCM. The UVM Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify UVM as the clearest survival context for C1GALT1C1 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
UVMDFSQuartileAll0.2610.839<.00195view →
KIRCDFSQuartileAll0.7140.491<.00167view →
KIRPDFSQuartileAll0.8170.955.00259view →
LGGOSMedianAll0.7300.890<.00149view →
THCADFSTertileAll0.9520.857<.00138view →
SKCMOSTertileAll0.3820.258.00134view →
Pink = unfavorable, green = favorable. all 23 lineages →

C1GALT1C1-UVM (DFS)

Kaplan–Meier survival curve for C1GALT1C1 RNA expression in UVM: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes C1GALT1C1 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 13, while mass-spec protein shows differences in 3. The strongest signals are observed in KICH for RNA and PDAC for protein.
C1GALT1C1 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot13KICH (9)view →
Protein (mass-spec)Box plot3PDAC (6)view →
This table ranks reproducible tumor–normal expression differences for C1GALT1C1. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. C1GALT1C1 shows lower tumor expression in KICH and higher tumor expression in STAD, LUAD, COAD, LIHC and HNSC. The KICH box plot shows higher C1GALT1C1 RNA expression in normal versus tumor tissue (log2 FC = −1.054, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
KICHFemaleAll−1.054<.0019view →
STADMaleAll+0.852<.0018view →
LUADMaleII,III,IV+0.650<.0018view →
COADAllAll+0.453<.0018view →
LIHCMaleII,III,IV+0.910<.0017view →
HNSCAllIII,IV+0.489.0017view →
Green = repressed in tumor. all 13 lineages →

C1GALT1C1-KICH

Tumor-vs-normal expression box plot for C1GALT1C1 in KICH.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with C1GALT1C1 in patient tissues and cancer cell lines. In patient samples, C1GALT1C1 shows the broadest associations at the RNA and protein expression levels, with UVM recurring as the lineage with the largest associated feature set. In cancer cell lines, C1GALT1C1 RNA and mutation anchors are most strongly linked to RNA-expression features, especially in SOFT_TISSUE, while CRISPR and shRNA rows add functional-dependency signals in UPPER_AERODIGESTIVE_TRACT and LARGE_INTESTINE.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA19,020UVM (9546)view →
Function (RNA)7,168SKCM (4435)view →
Protein (mass-spec)
Protein (mass-spec)14,693LSCC (4320)view →
RNA9,127GBM (4062)view →
Mutation
RNA1,681UCEC (1399)view →
Protein (RPPA)43UCEC (43)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR1,744SOFT_TISSUE (146)view →
RNA1,458SOFT_TISSUE (243)view →
RNA
RNA9,261UPPER_AERODIGESTIVE_TRACT (3239)view →
Function (RNA)3,712SOFT_TISSUE (1001)view →
Mutation
Mutation4,192LARGE_INTESTINE (4192)view →
RNA3LARGE_INTESTINE (3)view →
Protein (mass-spec)
Protein (mass-spec)1,841CNS (1058)view →
Function (mass-spec)1,707CNS (757)view →