C1GALT1C1

Across TCGA patient cohorts, C1GALT1C1 protein abundance is significantly associated with the RNA expression of many other genes, with 9,127 significant associations in total. GBM shows the largest number of these associations.

The most reproducible C1GALT1C1-associated genes across cancer lineages are C1GALT1, EFS, and MED13L. Each is linked with C1GALT1C1 in more than 3 cancer types. Because this analysis shows association rather than direction, both C1GALT1C1-to-partner and partner-to-C1GALT1C1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, C1GALT1C1 versus C1GALT1 in LSCC, with a Pearson correlation of 0.54.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (C1GALT1C1→partner) and Y-score (partner→C1GALT1C1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	C1GALT1 →	+0.744	+0.421	<.001	<.001	3	4
LSCC	EFS →	-1.020	-0.319	<.001	.001	3	4
GBM	MED13L →	-0.509	-0.356	.002	.001	3	4
HNSC	CEP68 →	-0.459	-0.368	.002	<.001	3	4
GBM	SPPL3 →	-0.492	-0.450	<.001	<.001	3	4
GBM	MAGEL2 →	-0.630	-0.351	.003	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 9,127 associations by consensus.

C1GALT1C1 vs C1GALT1 — LSCC

Explore this scatter interactively →