SYNPO2

associated omics data
synaptopodin 2Genealiases: []

Q-omics provides the consensus-scored SYNPO2 profile across patient tissues and cancer cell-line models. SYNPO2 expression is associated with patient survival in 27 of 34 cancer types, with the highest sampling consensus in KIRP. Among the 18 cancer types available for tumor–normal comparison, SYNPO2 is differentially expressed in 15, with the highest sampling consensus in BLCA. Additionally, SYNPO2 protein abundance shows 31,911 significant protein co-abundance associations, with the highest sampling consensus in LUAD. Together, these results highlight KIRP, BLCA, and LUAD as cancer lineages where SYNPO2 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes SYNPO2 survival associations across molecular data types. SYNPO2 RNA expression shows survival associations in the most cancer types (27), followed by mutation status (7) and mass-spec protein abundance (4). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
SYNPO2 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier27KIRP (102)view →
MutationKaplan–Meier7THYM (42)view →
Protein (mass-spec)Kaplan–Meier4PDAC (71)view →
This table ranks reproducible SYNPO2 RNA expression–survival associations across cancer types. High SYNPO2 expression shows unfavorable associations in KIRP and BLCA, but favorable associations in KIRC, SKCM, BRCA and UCEC. The KIRP Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify KIRP as the clearest survival context for SYNPO2 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
KIRPOSTertileAll0.8720.976<.001102view →
KIRCOSTertileAll0.7480.565<.00185view →
SKCMOSTertileII,III,IV0.3600.250.00256view →
BLCAOSTertileAll0.3010.604<.00149view →
BRCADFSMedianIII,IV0.5660.409<.00148view →
UCECOSMedianII,III,IV0.7380.444.00440view →
Pink = unfavorable, green = favorable. all 27 lineages →

SYNPO2-KIRP (OS)

Kaplan–Meier survival curve for SYNPO2 RNA expression in KIRP: high vs low expression groups.

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Tumor vs Normal expression

This table summarizes SYNPO2 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 15, while mass-spec protein shows differences in 7. The strongest signals are observed in THCA for RNA and COAD for protein.
SYNPO2 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot15THCA (11)view →
Protein (mass-spec)Box plot7COAD (11)view →
This table ranks reproducible tumor–normal expression differences for SYNPO2. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. SYNPO2 shows lower tumor expression in BLCA, COAD, KICH, THCA, LUAD and KIRP. The BLCA box plot shows higher SYNPO2 RNA expression in normal versus tumor tissue (log2 FC = −6.528, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
BLCAMaleIII,IV−6.528<.00111view →
COADMaleII,III,IV−3.212<.00111view →
KICHMaleII,III,IV−2.576<.00111view →
THCAAllIV−1.965<.00111view →
LUADFemaleIII,IV−1.983<.0018view →
KIRPMaleAll−1.639<.0018view →
Green = repressed in tumor. all 15 lineages →

SYNPO2-BLCA

Tumor-vs-normal expression box plot for SYNPO2 in BLCA.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with SYNPO2 in patient tissues and cancer cell lines. In patient samples, SYNPO2 shows the broadest associations at the RNA and protein expression levels, with LUAD recurring as the lineage with the largest associated feature set. In cancer cell lines, SYNPO2 RNA and mutation anchors are most strongly linked to RNA-expression features, especially in PANCREAS, while CRISPR and shRNA rows add functional-dependency signals in LARGE_INTESTINE and BONE.
Associated data typeStrength (# associated data)Lineage of highest associated data
Protein (mass-spec)
Protein (mass-spec)31,911LUAD (9884)view →
RNA16,763LSCC (6287)view →
RNA
Protein (mass-spec)27,032GBM (6625)view →
RNA18,367THYM (7608)view →
Mutation
RNA6,777UCEC (5106)view →
Protein (RPPA)61UCEC (38)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR1,671PANCREAS (127)view →
RNA1,239LARGE_INTESTINE (200)view →
RNA
RNA5,725BONE (1460)view →
Function (RNA)2,696BONE (753)view →
Mutation
Mutation5,485LARGE_INTESTINE (3944)view →
RNA287BLOOD_Leukemia (142)view →
shRNA
RNA1,350BREAST (672)view →
CRISPR1,029SKIN (198)view →