SPANXN3

associated omics data
SPANX family member N3Genealiases: CT11.8 · SPANX-N3

Q-omics provides the consensus-scored SPANXN3 profile across patient tissues and cancer cell-line models. SPANXN3 expression is associated with patient survival in 17 of 34 cancer types, with the highest sampling consensus in HNSC. Among the 18 cancer types available for tumor–normal comparison, SPANXN3 is differentially expressed in 3, with the highest sampling consensus in HNSC. Additionally, SPANXN3 RNA expression shows 4,630 significant pathway-activity associations, with the highest sampling consensus in STAD. Together, these results highlight HNSC, and STAD as cancer lineages where SPANXN3 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes SPANXN3 survival associations across molecular data types. SPANXN3 RNA expression shows survival associations in the most cancer types (17), followed by mutation status (5). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
SPANXN3 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier17HNSC (144)view →
MutationKaplan–Meier5STAD (24)view →
This table ranks reproducible SPANXN3 RNA expression–survival associations across cancer types. High SPANXN3 expression shows unfavorable associations in HNSC, UVM, KICH, CESC, LUSC and LUAD. The HNSC Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify HNSC as the clearest survival context for SPANXN3 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
HNSCOSTertileAll0.5400.717<.001144view →
UVMDFSTertileAll0.1460.764<.001117view →
KICHDFSTertileAll0.0430.971<.00199view →
CESCOSTertileIII,IV0.1910.698<.00172view →
LUSCDFSTertileIII,IV0.0450.790<.00154view →
LUADDFSTertileIV0.2930.729.00842view →
Pink = unfavorable, green = favorable. all 17 lineages →

SPANXN3-HNSC (OS)

Kaplan–Meier survival curve for SPANXN3 RNA expression in HNSC: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes SPANXN3 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 3. The strongest signals are observed in BRCA for RNA.
SPANXN3 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot3BRCA (6)view →
This table ranks reproducible tumor–normal expression differences for SPANXN3. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. SPANXN3 shows higher tumor expression in HNSC, BRCA and KIRP. The HNSC box plot shows higher SPANXN3 RNA expression in tumor versus normal tissue (log2 FC = +0.087, t-test p = .008).
LineageGenderStageFold-changepSampling consensus
HNSCFemaleAll+0.087.0086view →
BRCAAllII,III,IV+0.082<.0016view →
KIRPAllIII,IV+0.132.0392view →
Green = repressed in tumor. all 3 lineages →

SPANXN3-HNSC

Tumor-vs-normal expression box plot for SPANXN3 in HNSC.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with SPANXN3 in patient tissues and cancer cell lines. In patient samples, SPANXN3 shows the broadest associations at the RNA and protein expression levels, with STAD recurring as the lineage with the largest associated feature set. In cancer cell lines, SPANXN3 RNA and mutation anchors are most strongly linked to RNA-expression features, especially in LUNG_NSCLC_LUAD, while CRISPR and shRNA rows add functional-dependency signals in SOFT_TISSUE and BLOOD_Leukemia.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
Function (RNA)4,630STAD (1254)view →
RNA4,619LIHC (1252)view →
Mutation
RNA1,336UCEC (1087)view →
Protein (RPPA)26UCEC (25)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR1,834LUNG_NSCLC_LUAD (162)view →
RNA1,171SOFT_TISSUE (232)view →
RNA
RNA1,295BLOOD_Leukemia (338)view →
Function (RNA)410KIDNEY (100)view →
Mutation
Mutation259LARGE_INTESTINE (245)view →
RNA7LUNG_SCLC (4)view →