SPANXN3

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SPANXN3 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,630 significant associations in total. STAD shows the largest number of these associations.

The most reproducible SPANXN3-associated GO terms across cancer lineages are Negative regulation of alpha-beta T cell activation, Collagen fibril organization, and Interleukin-17 production. Each is linked with SPANXN3 in more than 7 cancer types. Because this analysis shows association rather than direction, both SPANXN3-to-partner and partner-to-SPANXN3 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SPANXN3→partner) and Y-score (partner→SPANXN3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PAADNegative regulation of alpha-beta T cell activation →+0.025+0.165<.001<.00137
BLCACollagen fibril organization →+0.040+0.045<.001.00228
LIHCInterleukin-17 production →+0.027+0.039<.001<.00137
LUADSpindle midzone assembly →+0.061+0.049<.001<.00136
LUADTendon development →+0.073+0.066<.001<.00127
STADRegulation of reproductive process →+0.021+0.120<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,630 associations by consensus.

Exploration