SPANXN3

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SPANXN3 mutation is significantly associated with the total protein of many other genes, with 26 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SPANXN3-associated genes across cancer lineages are EGFR_pY1068, MEK1, and MSH2. Each is linked with SPANXN3 in more than 1 cancer types. Because this analysis shows association rather than direction, both SPANXN3-to-partner and partner-to-SPANXN3 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SPANXN3→partner) and Y-score (partner→SPANXN3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECEGFR_pY1068 →-0.317-3.459.006.00531
UCECMEK1 →+0.391+3.321.021.01031
UCECMSH2 →-0.335-2.973.001.03531
UCECN-Ras →-0.112-3.687.043.00131
UCECp21 →+0.288+2.584.001.01131
UCECp62 Lck ligand →+0.347+2.817.022.03631
Each partner links to its Q-omics profile. Showing the 6 strongest of 26 associations by consensus.

Exploration