SHPK

associated omics data
sedoheptulokinaseGenealiases: CARKL · SHK

Q-omics provides the consensus-scored SHPK profile across patient tissues and cancer cell-line models. SHPK expression is associated with patient survival in 24 of 34 cancer types, with the highest sampling consensus in SCLC. Among the 18 cancer types available for tumor–normal comparison, SHPK is differentially expressed in 10, with the highest sampling consensus in BLCA. Additionally, SHPK RNA expression shows 16,821 significant gene co-expression associations, with the highest sampling consensus in UVM. Together, these results highlight SCLC, BLCA, and UVM as cancer lineages where SHPK shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes SHPK survival associations across molecular data types. SHPK RNA expression shows survival associations in the most cancer types (24), followed by mutation status (6). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
SHPK data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier24SCLC (69)view →
MutationKaplan–Meier6BRCA (24)view →
This table ranks reproducible SHPK RNA expression–survival associations across cancer types. High SHPK expression shows unfavorable associations in UVM, LGG, ACC and SKCM, but favorable associations in SCLC and KIRP. The SCLC Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p < 0.001). Together, the overview and detailed table identify SCLC as the clearest survival context for SHPK RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
SCLCOSMedianAll0.8370.570<.00169view →
UVMDFSMedianII,III,IV0.4320.717.00359view →
LGGDFSMedianAll0.7810.880<.00151view →
ACCOSTertileIV0.2870.932.00146view →
KIRPDFSQuartileAll0.9760.808<.00144view →
SKCMOSTertileAll0.2620.401<.00142view →
Pink = unfavorable, green = favorable. all 24 lineages →

SHPK-SCLC (OS)

Kaplan–Meier survival curve for SHPK RNA expression in SCLC: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes SHPK tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 10. The strongest signals are observed in BLCA for RNA.
SHPK data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot10BLCA (11)view →
This table ranks reproducible tumor–normal expression differences for SHPK. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. SHPK shows lower tumor expression in KICH and LIHC and higher tumor expression in BLCA, STAD, THCA and HNSC. The BLCA box plot shows higher SHPK RNA expression in tumor versus normal tissue (log2 FC = +0.602, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
BLCAAllAll+0.602<.00111view →
STADAllII,III,IV+0.615<.00110view →
KICHMaleAll−0.827<.0017view →
LIHCAllAll−0.342<.0016view →
THCAAllAll+0.377<.0015view →
HNSCAllAll+0.311.0074view →
Green = repressed in tumor. all 10 lineages →

SHPK-BLCA

Tumor-vs-normal expression box plot for SHPK in BLCA.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with SHPK in patient tissues and cancer cell lines. In patient samples, SHPK shows the broadest associations at the RNA and protein expression levels, with UVM recurring as the lineage with the largest associated feature set. In cancer cell lines, SHPK RNA and mutation anchors are most strongly linked to RNA-expression features, especially in LUNG_NSCLC_LUAD, while CRISPR and shRNA rows add functional-dependency signals in SKIN and BLOOD_Leukemia.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA16,821UVM (5122)view →
Mutation11,607UCEC (11591)view →
Mutation
RNA1,676UCEC (1585)view →
Protein (RPPA)12UCEC (12)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
RNA2,006LUNG_NSCLC_LUAD (342)view →
CRISPR1,728SKIN (164)view →
RNA
RNA11,428BLOOD_Leukemia (5236)view →
Function (RNA)4,582BLOOD_Leukemia (1469)view →
Mutation
Mutation2,173BLOOD_Leukemia (1284)view →
RNA19LARGE_INTESTINE (13)view →
shRNA
shRNA2,018SKIN (406)view →
RNA1,654BLOOD_Leukemia (408)view →