SCYL1

associated omics data
SCY1 like pseudokinase 1Genealiases: GKLP · HT019 · NKTL · NTKL · P105 · SCAR21

Q-omics provides the consensus-scored SCYL1 profile across patient tissues and cancer cell-line models. SCYL1 expression is associated with patient survival in 22 of 34 cancer types, with the highest sampling consensus in ACC. Among the 18 cancer types available for tumor–normal comparison, SCYL1 is differentially expressed in 14, with the highest sampling consensus in HNSC. Additionally, SCYL1 RNA expression shows 18,263 significant gene co-expression associations, with the highest sampling consensus in ACC. Together, these results highlight ACC, and HNSC as cancer lineages where SCYL1 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes SCYL1 survival associations across molecular data types. SCYL1 RNA expression shows survival associations in the most cancer types (22), followed by mutation status (3) and mass-spec protein abundance (5). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
SCYL1 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier22ACC (96)view →
Protein (mass-spec)Kaplan–Meier5HNSC (35)view →
MutationKaplan–Meier3GBM (3)view →
This table ranks reproducible SCYL1 RNA expression–survival associations across cancer types. High SCYL1 expression shows unfavorable associations in ACC, KICH, BLCA, LUSC and HNSC, but favorable associations in SCLC. The ACC Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify ACC as the clearest survival context for SCYL1 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
ACCDFSMedianAll0.2300.660<.00196view →
KICHOSMedianIII,IV0.3470.942.00195view →
BLCAOSTertileII,III,IV0.6190.745.00660view →
LUSCDFSMedianIII,IV0.4350.996.00341view →
HNSCOSMedianAll0.7120.788.00536view →
SCLCOSMedianAll0.8450.558<.00131view →
Pink = unfavorable, green = favorable. all 22 lineages →

SCYL1-ACC (DFS)

Kaplan–Meier survival curve for SCYL1 RNA expression in ACC: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes SCYL1 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 14, while mass-spec protein shows differences in 7. The strongest signals are observed in HNSC for RNA and HNSC for protein.
SCYL1 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot14HNSC (12)view →
Protein (mass-spec)Box plot7HNSC (11)view →
This table ranks reproducible tumor–normal expression differences for SCYL1. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. SCYL1 shows higher tumor expression in HNSC, KIRC, BLCA, COAD, LIHC and LUSC. The HNSC box plot shows higher SCYL1 RNA expression in tumor versus normal tissue (log2 FC = +0.897, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
HNSCMaleIII,IV+0.897<.00112view →
KIRCFemaleAll+0.581<.00111view →
BLCAAllAll+0.503<.00110view →
COADMaleIII,IV+0.450<.0019view →
LIHCFemaleII,III,IV+0.835<.0018view →
LUSCMaleII,III,IV+0.571<.0017view →
Green = repressed in tumor. all 14 lineages →

SCYL1-HNSC

Tumor-vs-normal expression box plot for SCYL1 in HNSC.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with SCYL1 in patient tissues and cancer cell lines. In patient samples, SCYL1 shows the broadest associations at the RNA and protein expression levels, with ACC recurring as the lineage with the largest associated feature set. In cancer cell lines, SCYL1 RNA and mutation anchors are most strongly linked to RNA-expression features, especially in SKIN, while CRISPR and shRNA rows add functional-dependency signals in URINARY_TRACT and LARGE_INTESTINE.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA18,263ACC (9384)view →
Function (RNA)7,139OV (3508)view →
Protein (mass-spec)
Protein (mass-spec)12,474LSCC (3834)view →
RNA11,009LSCC (5672)view →
Mutation
RNA2,525UCEC (2434)view →
Protein (RPPA)39UCEC (39)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR2,019SKIN (164)view →
RNA1,875URINARY_TRACT (462)view →
RNA
RNA9,506LARGE_INTESTINE (3436)view →
Function (RNA)3,613SOFT_TISSUE (936)view →
Mutation
Mutation6,138LARGE_INTESTINE (3575)view →
RNA497LARGE_INTESTINE (467)view →
Protein (mass-spec)
RNA1,930BLOOD_Lymphoma (327)view →
Protein (mass-spec)1,567UPPER_AERODIGESTIVE_TRACT (473)view →