RABEP1

associated omics data
rabaptin, RAB GTPase binding effector protein 1Genealiases: RAB5EP · RABPT5

Q-omics provides the consensus-scored RABEP1 profile across patient tissues and cancer cell-line models. RABEP1 expression is associated with patient survival in 25 of 34 cancer types, with the highest sampling consensus in MESO. Among the 18 cancer types available for tumor–normal comparison, RABEP1 is differentially expressed in 14, with the highest sampling consensus in HNSC. Additionally, RABEP1 protein abundance shows 28,339 significant protein co-abundance associations, with the highest sampling consensus in BRCA. Together, these results highlight MESO, HNSC, and BRCA as cancer lineages where RABEP1 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes RABEP1 survival associations across molecular data types. RABEP1 RNA expression shows survival associations in the most cancer types (25), followed by mutation status (7) and mass-spec protein abundance (7). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
RABEP1 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier25MESO (58)view →
MutationKaplan–Meier7LIHC (18)view →
Protein (mass-spec)Kaplan–Meier7COAD (36)view →
This table ranks reproducible RABEP1 RNA expression–survival associations across cancer types. High RABEP1 expression shows unfavorable associations in MESO, KICH and UVM, but favorable associations in KIRC, BRCA and SCLC. The MESO Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p = .003). Together, the overview and detailed table identify MESO as the clearest survival context for RABEP1 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
MESODFSQuartileIII,IV0.1970.540.00358view →
KICHOSQuartileAll0.5801.000.00154view →
KIRCDFSMedianAll0.7440.503.00150view →
UVMDFSTertileIII,IV0.2290.860.00147view →
BRCAOSMedianIII,IV0.9580.846<.00143view →
SCLCDFSQuartileAll0.4250.129.01631view →
Pink = unfavorable, green = favorable. all 25 lineages →

RABEP1-MESO (DFS)

Kaplan–Meier survival curve for RABEP1 RNA expression in MESO: high vs low expression groups.

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Tumor vs Normal expression

This table summarizes RABEP1 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 14, while mass-spec protein shows differences in 7. The strongest signals are observed in HNSC for RNA and COAD for protein.
RABEP1 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot14HNSC (11)view →
Protein (mass-spec)Box plot7COAD (11)view →
This table ranks reproducible tumor–normal expression differences for RABEP1. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. RABEP1 shows lower tumor expression in BLCA, THCA, LUAD and KICH and higher tumor expression in HNSC and CHOL. The HNSC box plot shows higher RABEP1 RNA expression in tumor versus normal tissue (log2 FC = +0.759, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
HNSCFemaleIV+0.759<.00111view →
BLCAMaleIV−1.142<.0018view →
THCAAllAll−0.334<.0017view →
LUADFemaleII,III,IV−0.653<.0016view →
CHOLAllAll+0.903<.0015view →
KICHAllAll−0.626<.0015view →
Green = repressed in tumor. all 14 lineages →

RABEP1-HNSC

Tumor-vs-normal expression box plot for RABEP1 in HNSC.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with RABEP1 in patient tissues and cancer cell lines. In patient samples, RABEP1 shows the broadest associations at the RNA and protein expression levels, with BRCA recurring as the lineage with the largest associated feature set. In cancer cell lines, RABEP1 RNA and mutation anchors are most strongly linked to RNA-expression features, especially in BLOOD_Leukemia, while CRISPR and shRNA rows add functional-dependency signals in OESOPHAGUS and LARGE_INTESTINE.
Associated data typeStrength (# associated data)Lineage of highest associated data
Protein (mass-spec)
Protein (mass-spec)28,339BRCA (7360)view →
RNA17,821BRCA (8538)view →
RNA
RNA20,481UVM (9529)view →
Protein (mass-spec)17,545BRCA (6912)view →
Mutation
RNA3,249UCEC (3074)view →
Protein (RPPA)41UCEC (39)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR1,799BLOOD_Leukemia (176)view →
RNA1,544OESOPHAGUS (269)view →
RNA
RNA12,504BLOOD_Leukemia (5577)view →
Function (RNA)5,299BLOOD_Leukemia (1835)view →
Mutation
Mutation4,493LARGE_INTESTINE (3675)view →
RNA10SKIN (5)view →
shRNA
shRNA1,986OVARY (295)view →
RNA1,837LUNG_SCLC (401)view →