RABEP1

Across TCGA patient cohorts, RABEP1 mutation is significantly associated with the RNA expression of many other genes, with 3,249 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RABEP1-associated genes across cancer lineages are LINC01078, PIGG, and PGBD4. Each is linked with RABEP1 in more than 1 cancer types. Because this analysis shows association rather than direction, both RABEP1-to-partner and partner-to-RABEP1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, LINC01078 grouped by RABEP1-low versus RABEP1-high in CESC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RABEP1→partner) and Y-score (partner→RABEP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
CESC	LINC01078 →	+0.125	+5.201	<.001	.007	3	2
SKCM	PIGG →	+0.492	+3.491	.008	.002	3	2
SKCM	PGBD4 →	+0.453	+3.478	.006	.002	3	2
SKCM	BANF1P5 →	+0.116	+2.287	.002	.007	3	2
SKCM	ZNF674-AS1 →	+0.596	+3.491	.008	.002	3	2
UCEC	DUS4L →	+0.380	+2.269	<.001	<.001	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,249 associations by consensus.

LINC01078 by RABEP1 expression — CESC

Explore this box plot interactively →