KPNA1

associated omics data
karyopherin subunit alpha 1Genealiases: IPOA5 · NPI-1 · RCH2 · SRP1

Q-omics provides the consensus-scored KPNA1 profile across patient tissues and cancer cell-line models. KPNA1 expression is associated with patient survival in 25 of 34 cancer types, with the highest sampling consensus in MESO. Among the 18 cancer types available for tumor–normal comparison, KPNA1 is differentially expressed in 13, with the highest sampling consensus in HNSC. Additionally, KPNA1 protein abundance shows 21,804 significant protein co-abundance associations, with the highest sampling consensus in LSCC. Together, these results highlight MESO, HNSC, and LSCC as cancer lineages where KPNA1 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes KPNA1 survival associations across molecular data types. KPNA1 RNA expression shows survival associations in the most cancer types (25), followed by mutation status (8) and mass-spec protein abundance (9). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
KPNA1 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier25MESO (93)view →
Protein (mass-spec)Kaplan–Meier9CCRCC (44)view →
MutationKaplan–Meier8UCEC (34)view →
This table ranks reproducible KPNA1 RNA expression–survival associations across cancer types. High KPNA1 expression shows unfavorable associations in MESO, LUAD, UCEC and ACC, but favorable associations in KIRC and UCS. The MESO Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p = .006). Together, the overview and detailed table identify MESO as the clearest survival context for KPNA1 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
MESOOSMedianAll0.3010.470.00693view →
LUADOSTertileAll0.2230.447<.00149view →
KIRCDFSMedianIII,IV0.5560.387.00747view →
UCECDFSTertileAll0.5880.766<.00136view →
ACCOSQuartileAll0.4850.838.00624view →
UCSDFSTertileIV0.9360.364.02424view →
Pink = unfavorable, green = favorable. all 25 lineages →

KPNA1-MESO (OS)

Kaplan–Meier survival curve for KPNA1 RNA expression in MESO: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes KPNA1 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 13, while mass-spec protein shows differences in 9. The strongest signals are observed in HNSC for RNA and COAD for protein.
KPNA1 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot13HNSC (11)view →
Protein (mass-spec)Box plot9COAD (10)view →
This table ranks reproducible tumor–normal expression differences for KPNA1. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. KPNA1 shows lower tumor expression in KICH and higher tumor expression in HNSC, LIHC, LUSC, BRCA and STAD. The HNSC box plot shows higher KPNA1 RNA expression in tumor versus normal tissue (log2 FC = +0.918, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
HNSCMaleIII,IV+0.918<.00111view →
LIHCAllII,III,IV+0.555<.0019view →
LUSCMaleII,III,IV+0.737<.0016view →
BRCAAllII,III,IV+0.386<.0016view →
KICHAllAll−0.741<.0015view →
STADAllII,III,IV+0.464.0213view →
Green = repressed in tumor. all 13 lineages →

KPNA1-HNSC

Tumor-vs-normal expression box plot for KPNA1 in HNSC.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with KPNA1 in patient tissues and cancer cell lines. In patient samples, KPNA1 shows the broadest associations at the RNA and protein expression levels, with LSCC recurring as the lineage with the largest associated feature set. In cancer cell lines, KPNA1 RNA and mutation anchors are most strongly linked to RNA-expression features, especially in LUNG_SCLC, while CRISPR and shRNA rows add functional-dependency signals in BREAST and BLOOD_Leukemia.
Associated data typeStrength (# associated data)Lineage of highest associated data
Protein (mass-spec)
Protein (mass-spec)21,804LSCC (5500)view →
RNA11,931LSCC (4988)view →
RNA
RNA20,572ACC (9302)view →
Protein (mass-spec)12,615LSCC (6541)view →
Mutation
RNA3,535UCEC (3430)view →
Protein (RPPA)48UCEC (48)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR1,781LUNG_SCLC (168)view →
RNA1,651BREAST (272)view →
RNA
RNA11,408BLOOD_Leukemia (5562)view →
Function (RNA)4,360LARGE_INTESTINE (1396)view →
shRNA
RNA3,927BREAST (2250)view →
shRNA2,181BREAST (852)view →
Protein (mass-spec)
RNA1,499PANCREAS (285)view →
CRISPR1,236LUNG_SCLC (145)view →