KPNA1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KPNA1 protein abundance is significantly associated with the RNA expression of many other genes, with 11,931 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible KPNA1-associated genes across cancer lineages are NAA50, UMPS, and CCDC58. Each is linked with KPNA1 in more than 7 cancer types. Because this analysis shows association rather than direction, both KPNA1-to-partner and partner-to-KPNA1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, KPNA1 versus NAA50 in LSCC, with a Pearson correlation of 0.53.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KPNA1→partner) and Y-score (partner→KPNA1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCNAA50 →+0.620+0.264<.001<.00138
LSCCUMPS →+0.830+0.352<.001<.00137
LSCCCCDC58 →+1.015+0.383<.001<.00137
OVCOX17 →+0.782+0.328<.001<.00136
LSCCMRPL3 →+0.810+0.327<.001<.00136
LSCCHACD2 →+0.507+0.293<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,931 associations by consensus.

KPNA1 vs NAA50 — LSCC

Per-sample scatter of KPNA1 vs NAA50 in LSCC (Pearson r = 0.53).

Explore this scatter interactively →

Exploration