KPNA1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KPNA1 RNA expression is significantly associated with the protein abundance of many other proteins, with 12,615 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible KPNA1-associated proteins across cancer lineages are FXR1, ZNF148, and NCK1. Each is linked with KPNA1 in more than 5 cancer types. Because this analysis shows association rather than direction, both KPNA1-to-partner and partner-to-KPNA1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, KPNA1 versus FXR1 in LSCC, with a Pearson correlation of 0.49.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (KPNA1→partner) and Y-score (partner→KPNA1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCFXR1 →+0.397+0.646<.001<.00136
LSCCZNF148 →+0.319+0.681<.001<.00136
PDACNCK1 →+0.258+0.199<.001.00735
LSCCTOPBP1 →+0.467+0.611<.001<.00135
LSCCUMPS →+0.458+0.699<.001<.00135
LSCCDCUN1D1 →+0.322+0.509<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,615 associations by consensus.

KPNA1 vs FXR1 — LSCC

Per-sample scatter of KPNA1 vs FXR1 in LSCC (Pearson r = 0.49).

Explore this scatter interactively →

Exploration