CNNM1

associated omics data
cyclin and CBS domain divalent metal cation transport mediator 1Genealiases: ACDP1 · CLP-1 · SLC70A1

Q-omics provides the consensus-scored CNNM1 profile across patient tissues and cancer cell-line models. CNNM1 expression is associated with patient survival in 29 of 34 cancer types, with the highest sampling consensus in LUAD. Among the 18 cancer types available for tumor–normal comparison, CNNM1 is differentially expressed in 15, with the highest sampling consensus in KICH. Additionally, CNNM1 RNA expression shows 24,295 significant protein co-abundance associations, with the highest sampling consensus in LSCC. Together, these results highlight LUAD, KICH, and LSCC as cancer lineages where CNNM1 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes CNNM1 survival associations across molecular data types. CNNM1 RNA expression shows survival associations in the most cancer types (29), followed by mutation status (8). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
CNNM1 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier29LUAD (80)view →
MutationKaplan–Meier8OV (24)view →
This table ranks reproducible CNNM1 RNA expression–survival associations across cancer types. High CNNM1 expression shows unfavorable associations in LUAD, SKCM, LAML and KICH, but favorable associations in KIRP and LGG. The LUAD Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify LUAD as the clearest survival context for CNNM1 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
LUADDFSTertileAll0.5620.789<.00180view →
KIRPOSMedianIII,IV0.7980.512.00556view →
SKCMOSTertileIV0.4650.896.00546view →
LGGDFSQuartileAll0.8430.667<.00137view →
LAMLDFSMedianAll0.2470.511<.00136view →
KICHOSQuartileIII,IV0.1730.820.00127view →
Pink = unfavorable, green = favorable. all 29 lineages →

CNNM1-LUAD (DFS)

Kaplan–Meier survival curve for CNNM1 RNA expression in LUAD: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes CNNM1 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 15. The strongest signals are observed in BLCA for RNA.
CNNM1 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot15BLCA (10)view →
This table ranks reproducible tumor–normal expression differences for CNNM1. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. CNNM1 shows lower tumor expression in KICH, BLCA and THCA and higher tumor expression in KIRP, LUSC and LIHC. The KICH box plot shows higher CNNM1 RNA expression in normal versus tumor tissue (log2 FC = −2.299, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
KICHMaleAll−2.299<.00110view →
BLCAAllIV−1.582<.00110view →
KIRPAllII,III,IV+1.846<.0019view →
LUSCFemaleAll+1.752<.0018view →
THCAMaleIII,IV−0.494<.0018view →
LIHCAllAll+0.914<.0017view →
Green = repressed in tumor. all 15 lineages →

CNNM1-KICH

Tumor-vs-normal expression box plot for CNNM1 in KICH.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with CNNM1 in patient tissues and cancer cell lines. In patient samples, CNNM1 shows the broadest associations at the RNA and protein expression levels, with LSCC recurring as the lineage with the largest associated feature set. In cancer cell lines, CNNM1 RNA and mutation anchors are most strongly linked to RNA-expression features, especially in SOFT_TISSUE, while CRISPR and shRNA rows add functional-dependency signals in URINARY_TRACT and BONE.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
Protein (mass-spec)24,295LSCC (11169)view →
RNA16,351UVM (7437)view →
Protein (mass-spec)
Protein (mass-spec)9,630GBM (9543)view →
RNA1,814GBM (1707)view →
Mutation
RNA5,302UCEC (4814)view →
Protein (RPPA)45UCEC (40)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR1,694SOFT_TISSUE (139)view →
RNA1,318URINARY_TRACT (235)view →
RNA
RNA6,333BONE (2525)view →
Function (RNA)3,254BONE (1256)view →
Mutation
Mutation5,945LARGE_INTESTINE (4973)view →
RNA937LARGE_INTESTINE (912)view →
shRNA
shRNA2,209SKIN (370)view →
RNA2,090LIVER (477)view →