CNBP

associated omics data
CCHC-type zinc finger nucleic acid binding proteinGenealiases: CNBP1 · DM2 · PROMM · RNF163 · ZCCHC22 · ZNF9

Q-omics provides the consensus-scored CNBP profile across patient tissues and cancer cell-line models. CNBP expression is associated with patient survival in 25 of 34 cancer types, with the highest sampling consensus in KIRC. Among the 18 cancer types available for tumor–normal comparison, CNBP is differentially expressed in 12, with the highest sampling consensus in HNSC. Additionally, CNBP protein abundance shows 21,834 significant protein co-abundance associations, with the highest sampling consensus in LSCC. Together, these results highlight KIRC, HNSC, and LSCC as cancer lineages where CNBP shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes CNBP survival associations across molecular data types. CNBP RNA expression shows survival associations in the most cancer types (25), followed by mutation status (2) and mass-spec protein abundance (8). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
CNBP data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier25KIRC (74)view →
Protein (mass-spec)Kaplan–Meier8COAD (48)view →
MutationKaplan–Meier2LIHC (12)view →
This table ranks reproducible CNBP RNA expression–survival associations across cancer types. High CNBP expression shows unfavorable associations in KIRP, KICH, ACC and PAAD, but favorable associations in KIRC and UCS. The KIRC Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p < 0.001). Together, the overview and detailed table identify KIRC as the clearest survival context for CNBP RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
KIRCOSQuartileAll0.7530.527<.00174view →
KIRPDFSMedianAll0.4640.709<.00167view →
KICHDFSMedianII,III,IV0.5930.920.00859view →
ACCDFSTertileAll0.1360.681<.00152view →
UCSOSMedianII,III,IV0.7710.447.01044view →
PAADDFSTertileAll0.1920.418<.00144view →
Pink = unfavorable, green = favorable. all 25 lineages →

CNBP-KIRC (OS)

Kaplan–Meier survival curve for CNBP RNA expression in KIRC: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes CNBP tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 12, while mass-spec protein shows differences in 5. The strongest signals are observed in HNSC for RNA and HNSC for protein.
CNBP data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot12HNSC (11)view →
Protein (mass-spec)Box plot5HNSC (11)view →
This table ranks reproducible tumor–normal expression differences for CNBP. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. CNBP shows lower tumor expression in THCA, UCEC and KICH and higher tumor expression in HNSC, COAD and LUSC. The HNSC box plot shows higher CNBP RNA expression in tumor versus normal tissue (log2 FC = +0.869, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
HNSCMaleIV+0.869<.00111view →
THCAAllAll−0.186.0038view →
COADAllAll+0.295<.0017view →
UCECAllAll−0.729<.0016view →
KICHFemaleAll−1.484<.0015view →
LUSCMaleAll+0.518<.0014view →
Green = repressed in tumor. all 12 lineages →

CNBP-HNSC

Tumor-vs-normal expression box plot for CNBP in HNSC.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with CNBP in patient tissues and cancer cell lines. In patient samples, CNBP shows the broadest associations at the RNA and protein expression levels, with LSCC recurring as the lineage with the largest associated feature set. In cancer cell lines, CNBP RNA and mutation anchors are most strongly linked to RNA-expression features, especially in BLOOD_Leukemia, while CRISPR and shRNA rows add functional-dependency signals in SKIN and UPPER_AERODIGESTIVE_TRACT.
Associated data typeStrength (# associated data)Lineage of highest associated data
Protein (mass-spec)
Protein (mass-spec)21,834LSCC (8486)view →
RNA10,152LSCC (8003)view →
RNA
RNA19,626ACC (10292)view →
Protein (mass-spec)12,417LSCC (6745)view →
Mutation
RNA134UCEC (125)view →
Protein (RPPA)7UCEC (7)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
RNA2,463BLOOD_Leukemia (669)view →
CRISPR2,052SKIN (167)view →
RNA
RNA7,549UPPER_AERODIGESTIVE_TRACT (2167)view →
Function (RNA)2,934CNS (764)view →
Protein (mass-spec)
RNA3,867PANCREAS (997)view →
Function (mass-spec)3,272UPPER_AERODIGESTIVE_TRACT (1029)view →
Mutation
Mutation2,427LARGE_INTESTINE (1804)view →
RNA5CNS (4)view →