CNBP

Across TCGA cell cohorts, CNBP RNA expression is significantly associated with the go_rna of many other GO terms, with 2,934 significant associations in total. CNS shows the largest number of these associations.

The most reproducible CNBP-associated GO terms across cancer lineages are mRNA 3'-splice site recognition, Antigen processing and presentation of peptide antigen, and Protein localization to condensed chromosome. Each is linked with CNBP in more than 11 cancer types. Because this analysis shows association rather than direction, both CNBP-to-partner and partner-to-CNBP results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, mRNA 3'-splice site recognition grouped by CNBP-low versus CNBP-high in LUNG_NSCLC_LUSC.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CNBP→partner) and Y-score (partner→CNBP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUNG_NSCLC_LUSC	mRNA 3'-splice site recognition →	+0.141	+0.725	.001	.002	3	12
LARGE_INTESTINE	Antigen processing and presentation of peptide antigen →	-0.135	-0.466	<.001	<.001	3	12
CNS	Protein localization to condensed chromosome →	+0.104	+0.548	<.001	<.001	3	11
KIDNEY	Ribosome localization →	+0.085	+0.425	.007	.009	3	10
KIDNEY	Ribosomal subunit export from nucleus →	+0.085	+0.425	.007	.009	3	10
CNS	RNA 5'-end processing →	+0.061	+0.563	<.001	<.001	3	10

Each partner links to its Q-omics profile. Showing the 6 strongest of 2,934 associations by consensus.

mRNA 3'-splice site recognition by CNBP expression — LUNG_NSCLC_LUSC

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