Microtubule severing

associated omics data
GO:0051013Ontology (GO BP)GO biological process · ~8 member genes

Q-omics provides the Microtubule severing (GO:0051013) pathway profile, scoring each patient from the combined activity of its roughly 8 member genes. Pathway activity is associated with patient survival in 22 of 34 cancer types, with the highest sampling consensus in UVM. Among the 18 cancer types available for tumor–normal comparison, the pathway is differentially active in 10, with the highest sampling consensus in HNSC. Additionally, pathway RNA activity shows 34,868 significant cross-omics associations, again with the highest sampling consensus in THCA. Together, these results highlight UVM, HNSC, and THCA as cancer lineages where the pathway shows reproducible signals across outcome, tissue activity, and molecular association analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns. Pathway-against-pathway and pathway-against-mutation comparisons are not available for ontology entities.

Survival associations

This table summarizes Microtubule severing survival associations by molecular data type. RNA-level pathway activity shows survival associations in the most cancer types (22). The rightmost column indicates the cancer type with the highest sampling consensus for each layer.
Data typeSurvival analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Kaplan–Meier22UVM (85)view →
GO function (Protein (mass-spec))Kaplan–Meier5CCRCC (19)view →
This table ranks reproducible pathway activity–survival associations across cancer types. High Microtubule severing activity shows favorable associations in KIRP and UCS, but unfavorable associations in UVM, KIRC, ACC and LGG. In the UVM Kaplan–Meier curve the high-activity group declines faster, consistent with the unfavorable association (log-rank p < 0.001). UVM ranks highest by sampling consensus for Microtubule severing.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
UVMOSTertileAll0.4470.766<.00185view →
KIRCDFSQuartileIII,IV0.2840.727<.00164view →
KIRPDFSQuartileAll1.0000.592.00453view →
ACCDFSQuartileAll0.2900.746.00151view →
UCSOSQuartileII,III,IV0.8190.377.00850view →
LGGOSMedianAll0.3560.530<.00148view →
Pink = unfavorable, green = favorable. all 22 lineages →

Microtubule severing-UVM (OS)

Kaplan–Meier survival curve for Microtubule severing pathway activity in UVM: high vs low activity groups.

Explore this curve interactively →

Tumor vs Normal activity

This table summarizes Microtubule severing tumor–normal activity differences by data type. RNA-level activity shows significant tumor–normal differences in 10 cancer types, while mass-spec protein activity shows differences in 4. The strongest signals are in HNSC for RNA and COAD for protein.
Data typeActivity analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Box plot10HNSC (10)view →
GO function (Protein (mass-spec))Box plot4COAD (8)view →
This table ranks reproducible tumor–normal activity differences for the pathway. A positive fold-change indicates higher activity in tumor tissue. The pathway shows higher tumor activity across HNSC and lower tumor activity in THCA, COAD, KIRC, BRCA and UCEC. In the HNSC box plot, tumor samples show higher pathway activity than matched normal samples (log2 FC = +0.043, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
HNSCAllIII,IV+0.043<.00110view →
THCAMaleIII,IV−0.070<.0019view →
COADAllII,III,IV−0.033<.0017view →
KIRCMaleII,III,IV−0.030<.0017view →
BRCAAllIII,IV−0.038<.0016view →
UCECAllAll−0.037.0046view →
Pink = higher activity in tumor. all 10 lineages →

Microtubule severing-HNSC

Tumor-vs-normal pathway-activity box plot for Microtubule severing in HNSC.

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Cross-omics associations

This table shows molecular features associated with Microtubule severing pathway activity in patient tissues and cancer cell lines. In patient samples, pathway activity is most strongly linked to RNA and protein features, with the largest associated set in THCA. In cancer cell lines, RNA-expression features and functional dependencies dominate, with the largest set in OVARY.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA34,868THCA (18626)view →
Protein (mass-spec)11,117GBM (4127)view →
Protein (mass-spec)
Protein (mass-spec)9,685LSCC (1952)view →
RNA2,530GBM (928)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
RNA892OVARY (286)view →
CRISPR872LUNG_NSCLC_LUAD (188)view →
RNA
RNA10,072BLOOD_Lymphoma (3745)view →
CRISPR2,035BONE (192)view →
shRNA
shRNA1,969SKIN (298)view →
RNA1,584KIDNEY (261)view →
Protein (mass-spec)
RNA864LUNG_SCLC (212)view →
CRISPR456BLOOD_Lymphoma (224)view →