Regulation of myelination

associated omics data
GO:0031641Ontology (GO BP)GO biological process · ~45 member genes

Q-omics provides the Regulation of myelination (GO:0031641) pathway profile, scoring each patient from the combined activity of its roughly 45 member genes. Pathway activity is associated with patient survival in 18 of 34 cancer types, with the highest sampling consensus in HNSC. Among the 18 cancer types available for tumor–normal comparison, the pathway is differentially active in 12, with the highest sampling consensus in BLCA. Additionally, pathway RNA activity shows 36,551 significant cross-omics associations, again with the highest sampling consensus in STAD. Together, these results highlight HNSC, BLCA, and STAD as cancer lineages where the pathway shows reproducible signals across outcome, tissue activity, and molecular association analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns. Pathway-against-pathway and pathway-against-mutation comparisons are not available for ontology entities.

Survival associations

This table summarizes Regulation of myelination survival associations by molecular data type. RNA-level pathway activity shows survival associations in the most cancer types (18). The rightmost column indicates the cancer type with the highest sampling consensus for each layer.
Data typeSurvival analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Kaplan–Meier18HNSC (115)view →
GO function (Protein (mass-spec))Kaplan–Meier6COAD (60)view →
This table ranks reproducible pathway activity–survival associations across cancer types. High Regulation of myelination activity shows favorable associations in HNSC and SKCM, but unfavorable associations in ACC, MESO, LGG and UVM. In the HNSC Kaplan–Meier curve the low-activity group declines faster, consistent with the favorable association (log-rank p < 0.001). HNSC ranks highest by sampling consensus for Regulation of myelination.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
HNSCDFSTertileII,III,IV0.8100.606<.001115view →
SKCMOSQuartileII,III,IV0.8770.535<.00180view →
ACCOSTertileII,III,IV0.5890.960<.00174view →
MESOOSTertileIII,IV0.2690.512.01033view →
LGGDFSTertileAll0.6480.808<.00132view →
UVMDFSQuartileII,III,IV0.3670.663.00832view →
Pink = unfavorable, green = favorable. all 18 lineages →

Regulation of myelination-HNSC (DFS)

Kaplan–Meier survival curve for Regulation of myelination pathway activity in HNSC: high vs low activity groups.

Explore this curve interactively →

Tumor vs Normal activity

This table summarizes Regulation of myelination tumor–normal activity differences by data type. RNA-level activity shows significant tumor–normal differences in 12 cancer types, while mass-spec protein activity shows differences in 5. The strongest signals are in BLCA for RNA and COAD for protein.
Data typeActivity analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Box plot12BLCA (10)view →
GO function (Protein (mass-spec))Box plot5COAD (9)view →
This table ranks reproducible tumor–normal activity differences for the pathway. A positive fold-change indicates higher activity in tumor tissue. The pathway shows consistently lower tumor activity across BLCA, LUAD, THCA, LUSC, KICH and BRCA. In the BLCA box plot, normal samples show higher pathway activity than tumor samples (log2 FC = −0.066, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
BLCAAllAll−0.066<.00110view →
LUADMaleIII,IV−0.106<.0019view →
THCAAllAll−0.049<.0019view →
LUSCFemaleII,III,IV−0.091<.0018view →
KICHMaleII,III,IV−0.066<.0018view →
BRCAAllII,III,IV−0.076<.0016view →
Pink = higher activity in tumor. all 12 lineages →

Regulation of myelination-BLCA

Tumor-vs-normal pathway-activity box plot for Regulation of myelination in BLCA.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with Regulation of myelination pathway activity in patient tissues and cancer cell lines. In patient samples, pathway activity is most strongly linked to RNA and protein features, with the largest associated set in STAD. In cancer cell lines, RNA-expression features and functional dependencies dominate, with the largest set in SKIN.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA36,551STAD (23479)view →
Protein (mass-spec)16,825GBM (7411)view →
Protein (mass-spec)
Protein (mass-spec)10,276GBM (2291)view →
RNA1,801GBM (496)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
RNA2,219SKIN (494)view →
CRISPR1,930SKIN (271)view →
RNA
RNA4,514SKIN (1004)view →
shRNA1,878BLOOD_Lymphoma (224)view →
Protein (mass-spec)
RNA1,783LUNG_NSCLC_LUAD (309)view →
CRISPR1,414PANCREAS (135)view →
shRNA
RNA1,326LARGE_INTESTINE (243)view →
CRISPR1,116UPPER_AERODIGESTIVE_TRACT (141)view →