RIMS3

associated omics data
regulating synaptic membrane exocytosis 3Genealiases: NIM3 · RIM 3 · RIM3

Q-omics provides the consensus-scored RIMS3 profile across patient tissues and cancer cell-line models. RIMS3 expression is associated with patient survival in 29 of 34 cancer types, with the highest sampling consensus in LIHC. Among the 18 cancer types available for tumor–normal comparison, RIMS3 is differentially expressed in 16, with the highest sampling consensus in COAD. Additionally, RIMS3 RNA expression shows 22,703 significant protein co-abundance associations, with the highest sampling consensus in GBM. Together, these results highlight LIHC, COAD, and GBM as cancer lineages where RIMS3 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes RIMS3 survival associations across molecular data types. RIMS3 RNA expression shows survival associations in the most cancer types (29), followed by mutation status (6) and mass-spec protein abundance (2). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
RIMS3 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier29LIHC (85)view →
MutationKaplan–Meier6READ (39)view →
Protein (mass-spec)Kaplan–Meier2LUAD (3)view →
This table ranks reproducible RIMS3 RNA expression–survival associations across cancer types. High RIMS3 expression shows unfavorable associations in LIHC, ACC, LUSC, THCA and UCEC, but favorable associations in UCS. The LIHC Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify LIHC as the clearest survival context for RIMS3 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
LIHCOSMedianAll0.7010.859<.00185view →
UCSOSMedianII,III,IV0.5770.221.00156view →
ACCOSMedianAll0.3900.882.00148view →
LUSCOSTertileIII,IV0.5220.841<.00143view →
THCAOSTertileAll0.9791.000.00737view →
UCECOSTertileAll0.5520.786<.00134view →
Pink = unfavorable, green = favorable. all 29 lineages →

RIMS3-LIHC (OS)

Kaplan–Meier survival curve for RIMS3 RNA expression in LIHC: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes RIMS3 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 16, while mass-spec protein shows differences in 3. The strongest signals are observed in KIRC for RNA and LUAD for protein.
RIMS3 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot16KIRC (10)view →
Protein (mass-spec)Box plot3LUAD (6)view →
This table ranks reproducible tumor–normal expression differences for RIMS3. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. RIMS3 shows lower tumor expression in COAD, KIRC, THCA, KICH and LUAD and higher tumor expression in LIHC. The COAD box plot shows higher RIMS3 RNA expression in normal versus tumor tissue (log2 FC = −1.248, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
COADAllIII,IV−1.248<.00110view →
KIRCMaleIII,IV−0.785<.00110view →
THCAMaleAll−0.819<.0019view →
KICHMaleII,III,IV−0.987<.0018view →
LUADAllII,III,IV−0.688<.0018view →
LIHCAllII,III,IV+0.565<.0018view →
Green = repressed in tumor. all 16 lineages →

RIMS3-COAD

Tumor-vs-normal expression box plot for RIMS3 in COAD.

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Cross-omics associations

This table shows molecular features associated with RIMS3 in patient tissues and cancer cell lines. In patient samples, RIMS3 shows the broadest associations at the RNA and protein expression levels, with GBM recurring as the lineage with the largest associated feature set. In cancer cell lines, RIMS3 RNA and mutation anchors are most strongly linked to RNA-expression features, especially in PANCREAS, while CRISPR and shRNA rows add functional-dependency signals in LARGE_INTESTINE and BLOOD_Leukemia.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
Protein (mass-spec)22,703GBM (9317)view →
RNA18,568TGCT (5183)view →
Protein (mass-spec)
Protein (mass-spec)10,782GBM (10548)view →
RNA3,147GBM (2971)view →
Mutation
RNA1,150UCEC (1032)view →
Protein (RPPA)32UCEC (32)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR2,056PANCREAS (173)view →
RNA1,515LARGE_INTESTINE (200)view →
RNA
RNA12,077BLOOD_Leukemia (5260)view →
Function (RNA)5,437BLOOD_Leukemia (1853)view →
Mutation
Mutation2,003BLOOD_Leukemia (1228)view →
RNA10LUNG_NSCLC_LUAD (5)view →
shRNA
shRNA1,729LUNG_NSCLC_LUSC (221)view →
RNA1,618OVARY (221)view →