KCNA3

associated omics data
potassium voltage-gated channel subfamily A member 3Genealiases: HGK5 · HLK3 · HPCN3 · HUKIII · KV1.3 · MK3

Q-omics provides the consensus-scored KCNA3 profile across patient tissues and cancer cell-line models. KCNA3 expression is associated with patient survival in 26 of 34 cancer types, with the highest sampling consensus in HNSC. Among the 18 cancer types available for tumor–normal comparison, KCNA3 is differentially expressed in 9, with the highest sampling consensus in COAD. Additionally, KCNA3 RNA expression shows 18,857 significant protein co-abundance associations, with the highest sampling consensus in LSCC. Together, these results highlight HNSC, COAD, and LSCC as cancer lineages where KCNA3 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes KCNA3 survival associations across molecular data types. KCNA3 RNA expression shows survival associations in the most cancer types (26), followed by mutation status (8) and mass-spec protein abundance (3). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
KCNA3 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier26HNSC (147)view →
MutationKaplan–Meier8UCEC (26)view →
Protein (mass-spec)Kaplan–Meier3LSCC (5)view →
This table ranks reproducible KCNA3 RNA expression–survival associations across cancer types. High KCNA3 expression shows favorable associations in HNSC, SKCM, UCEC, LUAD, CESC and OV. The HNSC Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p < 0.001). Together, the overview and detailed table identify HNSC as the clearest survival context for KCNA3 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
HNSCDFSMedianAll0.6750.530<.001147view →
SKCMOSMedianAll0.4250.256<.001116view →
UCECOSMedianIV0.8880.591.00194view →
LUADOSTertileII,III,IV0.8020.608<.00188view →
CESCOSMedianII,III,IV0.9140.733.00380view →
OVOSQuartileIV0.8600.564.00266view →
Pink = unfavorable, green = favorable. all 26 lineages →

KCNA3-HNSC (DFS)

Kaplan–Meier survival curve for KCNA3 RNA expression in HNSC: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes KCNA3 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 9, while mass-spec protein shows differences in 1. The strongest signals are observed in KIRC for RNA and LUAD for protein.
KCNA3 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot9KIRC (11)view →
Protein (mass-spec)Box plot1LUAD (7)view →
This table ranks reproducible tumor–normal expression differences for KCNA3. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. KCNA3 shows lower tumor expression in COAD, LUSC, UCEC, LUAD and THCA and higher tumor expression in KIRC. The COAD box plot shows higher KCNA3 RNA expression in normal versus tumor tissue (log2 FC = −1.538, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
COADFemaleIII,IV−1.538<.00111view →
KIRCMaleAll+0.790<.00111view →
LUSCFemaleII,III,IV−2.777<.0018view →
UCECAllII,III,IV−0.372.0086view →
LUADMaleAll−1.190<.0015view →
THCAAllAll−0.518.0014view →
Green = repressed in tumor. all 9 lineages →

KCNA3-COAD

Tumor-vs-normal expression box plot for KCNA3 in COAD.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with KCNA3 in patient tissues and cancer cell lines. In patient samples, KCNA3 shows the broadest associations at the RNA and protein expression levels, with LSCC recurring as the lineage with the largest associated feature set. In cancer cell lines, KCNA3 RNA and mutation anchors are most strongly linked to RNA-expression features, especially in OESOPHAGUS, while CRISPR and shRNA rows add functional-dependency signals in BONE and BLOOD_Leukemia.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
Protein (mass-spec)18,857LSCC (10111)view →
RNA18,329DLBC (6004)view →
Protein (mass-spec)
RNA11,216LSCC (9953)view →
Protein (mass-spec)9,919LSCC (6114)view →
Mutation
RNA5,032UCEC (4105)view →
Protein (RPPA)56UCEC (47)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR1,793OESOPHAGUS (162)view →
shRNA1,093BONE (195)view →
RNA
RNA5,905BLOOD_Leukemia (3942)view →
Function (RNA)2,354BLOOD_Leukemia (1510)view →
Mutation
Mutation3,985LARGE_INTESTINE (3172)view →
RNA531LARGE_INTESTINE (523)view →
shRNA
shRNA1,798SOFT_TISSUE (226)view →
RNA1,453BONE (267)view →