IGKV6D-21

associated omics data
immunoglobulin kappa variable 6D-21 (non-functional)Genealiases: A10 · IGKV6D21

Q-omics provides the consensus-scored IGKV6D-21 profile across patient tissues and cancer cell-line models. IGKV6D-21 expression is associated with patient survival in 21 of 34 cancer types, with the highest sampling consensus in HNSC. Among the 18 cancer types available for tumor–normal comparison, IGKV6D-21 is differentially expressed in 9, with the highest sampling consensus in COAD. Additionally, IGKV6D-21 RNA expression shows 8,012 significant gene co-expression associations, with the highest sampling consensus in TGCT. Together, these results highlight HNSC, COAD, and TGCT as cancer lineages where IGKV6D-21 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes IGKV6D-21 survival associations across molecular data types. IGKV6D-21 RNA expression shows survival associations in the most cancer types (21), followed by mutation status (3). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
IGKV6D-21 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier21HNSC (141)view →
MutationKaplan–Meier3STAD (48)view →
This table ranks reproducible IGKV6D-21 RNA expression–survival associations across cancer types. High IGKV6D-21 expression shows unfavorable associations in KIRP, but favorable associations in HNSC, BRCA, COAD, SKCM and CESC. The HNSC Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p < 0.001). Together, the overview and detailed table identify HNSC as the clearest survival context for IGKV6D-21 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
HNSCDFSMedianAll0.6720.534<.001141view →
BRCAOSMedianAll0.6200.536<.00177view →
COADDFSTertileAll0.7940.617<.00164view →
KIRPOSTertileAll0.6090.911.00948view →
SKCMOSMedianII,III,IV0.9300.754.00137view →
CESCDFSTertileAll0.8200.670.00832view →
Pink = unfavorable, green = favorable. all 21 lineages →

IGKV6D-21-HNSC (DFS)

Kaplan–Meier survival curve for IGKV6D-21 RNA expression in HNSC: high vs low expression groups.

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Tumor vs Normal expression

This table summarizes IGKV6D-21 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 9. The strongest signals are observed in COAD for RNA.
IGKV6D-21 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot9COAD (9)view →
This table ranks reproducible tumor–normal expression differences for IGKV6D-21. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. IGKV6D-21 shows lower tumor expression in COAD, BRCA, LIHC and READ and higher tumor expression in LUAD and KIRC. The COAD box plot shows higher IGKV6D-21 RNA expression in normal versus tumor tissue (log2 FC = −3.502, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
COADFemaleIII,IV−3.502<.0019view →
BRCAFemaleII,III,IV−0.916<.0016view →
LIHCMaleIII,IV−0.911<.0016view →
LUADFemaleAll+1.743<.0015view →
READAllAll−2.673.0013view →
KIRCAllAll+0.454.0143view →
Green = repressed in tumor. all 9 lineages →

IGKV6D-21-COAD

Tumor-vs-normal expression box plot for IGKV6D-21 in COAD.

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Cross-omics associations

This table shows molecular features associated with IGKV6D-21 in patient tissues and cancer cell lines. In patient samples, IGKV6D-21 shows the broadest associations at the RNA and protein expression levels, with TGCT recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA8,012TGCT (3518)view →
Protein (mass-spec)7,915LSCC (3011)view →
Mutation
RNA85UCEC (36)view →
Infiltrating cells1LUSC (1)view →
Protein (mass-spec)
RNA74LUAD (74)view →
Protein (mass-spec)45LUAD (45)view →