IGKV6D-21

RNA & survival
SurvivalRNAKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, IGKV6D-21 RNA is linked to patient survival in 21 of 34 cancer types, making it the most broadly survival-associated IGKV6D-21 data layer compared with 3 for mutation status.

The strongest signal is observed in head and neck squamous cell carcinoma (HNSC), where higher IGKV6D-21 RNA is associated with better disease-free survival. In most high-consensus cancer types, elevated IGKV6D-21 expression acts as an unfavorable survival marker, although some lineages such as HNSC and BRCA show a favorable association.

HNSC, BRCA, and COAD are the cancer types where IGKV6D-21 RNA most reproducibly stratifies survival.

RNA survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
HNSCDFSMedianAll0.6720.534<.001141view →
BRCAOSMedianAll0.6200.536<.00177view →
COADDFSTertileAll0.7940.617<.00164view →
KIRPOSTertileAll0.6090.911.00948view →
SKCMOSMedianII,III,IV0.9300.754.00137view →
CESCDFSTertileAll0.8200.670.00832view →
UVMDFSTertileAll0.2410.771.00427view →
MESOOSTertileII,III,IV0.7190.459.00726view →
PAADDFSMedianII,III,IV0.3670.218.00721view →
CHOLDFSMedianAll0.7630.121.00121view →
KIRCDFSTertileAll0.5830.701.01120view →
UCSOSTertileIII,IV0.1960.512.04618view →
Pink = unfavorable, green = favorable. Showing the 12 strongest of 21 lineages.

Exploration