IGHV3-65

associated omics data
immunoglobulin heavy variable 3-65 (pseudogene)Genealiases: 3-65P · IGHV365

Q-omics provides the consensus-scored IGHV3-65 profile across patient tissues and cancer cell-line models. IGHV3-65 expression is associated with patient survival in 14 of 34 cancer types, with the highest sampling consensus in HNSC. Among the 18 cancer types available for tumor–normal comparison, IGHV3-65 is differentially expressed in 6, with the highest sampling consensus in COAD. Additionally, IGHV3-65 RNA expression shows 8,199 significant gene co-expression associations, with the highest sampling consensus in THYM. Together, these results highlight HNSC, COAD, and THYM as cancer lineages where IGHV3-65 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes IGHV3-65 survival associations across molecular data types. IGHV3-65 RNA expression shows survival associations in the most cancer types (14), followed by mutation status (1). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
IGHV3-65 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier14HNSC (144)view →
MutationKaplan–Meier1LUSC (3)view →
This table ranks reproducible IGHV3-65 RNA expression–survival associations across cancer types. High IGHV3-65 expression shows unfavorable associations in ACC, UVM and DLBC, but favorable associations in HNSC, SKCM and BRCA. The HNSC Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p < 0.001). Together, the overview and detailed table identify HNSC as the clearest survival context for IGHV3-65 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
HNSCDFSMedianAll0.7540.640<.001144view →
ACCOSTertileAll0.4770.892<.001135view →
SKCMOSMedianAll0.4610.284<.00166view →
BRCADFSMedianAll0.9650.933.00365view →
UVMOSTertileII,III,IV0.1890.729.00145view →
DLBCDFSTertileIII,IV0.0700.855.00840view →
Pink = unfavorable, green = favorable. all 14 lineages →

IGHV3-65-HNSC (DFS)

Kaplan–Meier survival curve for IGHV3-65 RNA expression in HNSC: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes IGHV3-65 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 6. The strongest signals are observed in COAD for RNA.
IGHV3-65 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot6COAD (10)view →
This table ranks reproducible tumor–normal expression differences for IGHV3-65. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. IGHV3-65 shows lower tumor expression in COAD and BRCA and higher tumor expression in LUAD, KIRC, BLCA and HNSC. The COAD box plot shows higher IGHV3-65 RNA expression in normal versus tumor tissue (log2 FC = −1.124, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
COADFemaleAll−1.124<.00110view →
LUADFemaleAll+0.825<.0017view →
KIRCMaleAll+0.278<.0016view →
BLCAMaleAll+0.311.0272view →
BRCAFemaleAll−0.145.0262view →
HNSCAllIII,IV+0.426.0291view →
Green = repressed in tumor. all 6 lineages →

IGHV3-65-COAD

Tumor-vs-normal expression box plot for IGHV3-65 in COAD.

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Cross-omics associations

This table shows molecular features associated with IGHV3-65 in patient tissues and cancer cell lines. In patient samples, IGHV3-65 shows the broadest associations at the RNA and protein expression levels, with THYM recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA8,199THYM (3327)view →
Function (RNA)6,881BRCA (3966)view →
Mutation
RNA66SKCM (66)view →