IGHV3-20

associated omics data
immunoglobulin heavy variable 3-20Genealiases: IGHV320 · VH

Q-omics provides the consensus-scored IGHV3-20 profile across patient tissues and cancer cell-line models. IGHV3-20 expression is associated with patient survival in 23 of 34 cancer types, with the highest sampling consensus in HNSC. Among the 18 cancer types available for tumor–normal comparison, IGHV3-20 is differentially expressed in 7, with the highest sampling consensus in COAD. Additionally, IGHV3-20 RNA expression shows 8,894 significant mutation-linked associations, with the highest sampling consensus in UCEC. Together, these results highlight HNSC, COAD, and UCEC as cancer lineages where IGHV3-20 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes IGHV3-20 survival associations across molecular data types. IGHV3-20 RNA expression shows survival associations in the most cancer types (23), followed by mass-spec protein abundance (5). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
IGHV3-20 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier23HNSC (144)view →
Protein (mass-spec)Kaplan–Meier5GBM (11)view →
This table ranks reproducible IGHV3-20 RNA expression–survival associations across cancer types. High IGHV3-20 expression shows unfavorable associations in UVM, but favorable associations in HNSC, SKCM, UCEC, BRCA and SARC. The HNSC Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p < 0.001). Together, the overview and detailed table identify HNSC as the clearest survival context for IGHV3-20 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
HNSCDFSMedianAll0.6770.529<.001144view →
SKCMDFSQuartileAll0.7690.488<.00161view →
UCECDFSQuartileIII,IV0.7430.309.00146view →
BRCAOSTertileAll0.9750.939.00440view →
UVMDFSTertileAll0.4170.816<.00127view →
SARCOSTertileAll0.9150.789.00527view →
Pink = unfavorable, green = favorable. all 23 lineages →

IGHV3-20-HNSC (DFS)

Kaplan–Meier survival curve for IGHV3-20 RNA expression in HNSC: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes IGHV3-20 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 7, while mass-spec protein shows differences in 4. The strongest signals are observed in COAD for RNA and HNSC for protein.
IGHV3-20 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot7COAD (10)view →
Protein (mass-spec)Box plot4HNSC (8)view →
This table ranks reproducible tumor–normal expression differences for IGHV3-20. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. IGHV3-20 shows lower tumor expression in COAD, READ, LIHC and BRCA and higher tumor expression in LUAD and KIRC. The COAD box plot shows higher IGHV3-20 RNA expression in normal versus tumor tissue (log2 FC = −3.622, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
COADFemaleIII,IV−3.622<.00110view →
LUADMaleAll+2.019<.0016view →
KIRCMaleAll+1.101<.0014view →
READAllAll−2.042.0072view →
LIHCMaleAll−0.884.0082view →
BRCAFemaleAll−0.436.0432view →
Green = repressed in tumor. all 7 lineages →

IGHV3-20-COAD

Tumor-vs-normal expression box plot for IGHV3-20 in COAD.

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Cross-omics associations

This table shows molecular features associated with IGHV3-20 in patient tissues and cancer cell lines. In patient samples, IGHV3-20 shows the broadest associations at the RNA and protein expression levels, with UCEC recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
Mutation8,894UCEC (8878)view →
Protein (mass-spec)8,787LSCC (1769)view →
Protein (mass-spec)
Protein (mass-spec)6,039GBM (2495)view →
RNA4,768GBM (2831)view →
Mutation
RNA48SKCM (45)view →