GIPC2

associated omics data
GIPC PDZ domain containing family member 2Genealiases: SEMCAP-2 · SEMCAP2

Q-omics provides the consensus-scored GIPC2 profile across patient tissues and cancer cell-line models. GIPC2 expression is associated with patient survival in 23 of 34 cancer types, with the highest sampling consensus in KIRC. Among the 18 cancer types available for tumor–normal comparison, GIPC2 is differentially expressed in 15, with the highest sampling consensus in HNSC. Additionally, GIPC2 RNA expression shows 17,761 significant gene co-expression associations, with the highest sampling consensus in UVM. Together, these results highlight KIRC, HNSC, and UVM as cancer lineages where GIPC2 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes GIPC2 survival associations across molecular data types. GIPC2 RNA expression shows survival associations in the most cancer types (23), followed by mutation status (4) and mass-spec protein abundance (8). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
GIPC2 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier23KIRC (192)view →
Protein (mass-spec)Kaplan–Meier8CCRCC (49)view →
MutationKaplan–Meier4STAD (48)view →
This table ranks reproducible GIPC2 RNA expression–survival associations across cancer types. High GIPC2 expression shows unfavorable associations in SCLC, but favorable associations in KIRC, READ, HNSC, THCA and BRCA. The KIRC Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p < 0.001). Together, the overview and detailed table identify KIRC as the clearest survival context for GIPC2 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
KIRCOSMedianAll0.7810.472<.001192view →
READDFSQuartileAll0.7260.247<.00156view →
HNSCDFSTertileIV0.7240.553.00551view →
THCADFSTertileIV0.9100.413<.00149view →
BRCAOSMedianIII,IV0.8900.764.00236view →
SCLCDFSTertileII,III,IV0.1990.877.00628view →
Pink = unfavorable, green = favorable. all 23 lineages →

GIPC2-KIRC (OS)

Kaplan–Meier survival curve for GIPC2 RNA expression in KIRC: high vs low expression groups.

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Tumor vs Normal expression

This table summarizes GIPC2 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 15, while mass-spec protein shows differences in 7. The strongest signals are observed in HNSC for RNA and CCRCC for protein.
GIPC2 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot15HNSC (12)view →
Protein (mass-spec)Box plot7CCRCC (12)view →
This table ranks reproducible tumor–normal expression differences for GIPC2. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. GIPC2 shows lower tumor expression in HNSC, KICH, KIRP, THCA, LUSC and COAD. The HNSC box plot shows higher GIPC2 RNA expression in normal versus tumor tissue (log2 FC = −0.988, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
HNSCAllIII,IV−0.988<.00112view →
KICHAllIII,IV−4.097<.00111view →
KIRPAllIII,IV−2.654<.00110view →
THCAMaleIII,IV−0.964<.00110view →
LUSCFemaleII,III,IV−2.425<.0019view →
COADFemaleII,III,IV−1.141<.0019view →
Green = repressed in tumor. all 15 lineages →

GIPC2-HNSC

Tumor-vs-normal expression box plot for GIPC2 in HNSC.

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Cross-omics associations

This table shows molecular features associated with GIPC2 in patient tissues and cancer cell lines. In patient samples, GIPC2 shows the broadest associations at the RNA and protein expression levels, with UVM recurring as the lineage with the largest associated feature set. In cancer cell lines, GIPC2 RNA and mutation anchors are most strongly linked to RNA-expression features, especially in LUNG_NSCLC_LUAD, while CRISPR and shRNA rows add functional-dependency signals in BREAST and LARGE_INTESTINE.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA17,761UVM (7311)view →
Protein (mass-spec)14,248GBM (4073)view →
Protein (mass-spec)
Protein (mass-spec)17,481CCRCC (5712)view →
RNA10,711CCRCC (4988)view →
Mutation
RNA1,930UCEC (1846)view →
Protein (RPPA)34UCEC (34)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR1,872LUNG_NSCLC_LUAD (173)view →
RNA1,428BREAST (228)view →
RNA
RNA5,888LARGE_INTESTINE (1340)view →
Function (RNA)2,702SOFT_TISSUE (717)view →
shRNA
RNA1,191LUNG_NSCLC_LUSC (305)view →
shRNA920BLOOD_Myeloma (161)view →
Protein (mass-spec)
RNA737KIDNEY (159)view →
Function (RNA)477UPPER_AERODIGESTIVE_TRACT (120)view →